| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645579
GI number: 15645579
Start: 1020909
End: 1022252
Strand: Reverse
Name: Not Available
Synonym: HP0963
Alternate gene names: NA
Gene position: 1022252-1020909 (Counterclockwise)
Preceding gene: 15645580
Following gene: 15645578
Centisome position: 61.29
GC content: 38.69
Gene sequence:
>1344_bases ATGAGCGTTAATTTTTTTAAGGGCATTTTTAATGACAATAGCAGGGCTGAAAACCACCAAGACAACCACCAAAACAACCA TCAAGTGGGCTTAAAAGAGCGTTACGATTTGATCGCTCGTATTTTAAACGCCAGAATTGAAAATGAAGGGCTAGAAGAAT ATCAGAGCGTCTTGGATAACGAGTTTTTAGAGTTCGCTAGCGGCGTGGATTCGCTCAAAGAAAAGGAAATAGCGTTACTG ACGCTCCAAGAAATCCAAAAAGAATTGCAATTGGTAGCGAGCTACCCTAGTTTGTTCCAAAAAACCATCGTTGCGGTGGG GGGAGGGTTTAGCGCGGGCAAATCCACTTTTTTAAACAACTTGTTGGGCTTGAAATTAAAACTCCCTGAAGACATGAATC CCACCACAGCTATCCCCACTTATTGCTTAAAGGGTAAAAGAGAAGTTTTAATGGGGTTTTCTCAAAATGGGGGCATGGTG GAATTGCCACATCTCGCTTTTGACCATCAGTTTTTAAACTCCCTTGGCTTTAATTTGAAAGAGATCATGCCTTTCATGCT TTTAAGCGCTCCTAGCGTGCCTTTTGAATTTTTATGCTTCATAGACACGCCTGGTTTTAACTCCGCCAAGCAAGGCTATA CGGGTGGGGATAAAGAAGCCTCTAAAGAATCCCTAAAACACGCCAAACACATTCTGTGGCTCATTAGTTGCGAGAGTGGG GAGATTCACGAAGATGATTTAGAATATTTGCAAGAATTATACGAAGAAGGCAAGCAGGTTTTTATCGTATTGAGTAGGGC TGATAGGCGCACAAAAAGGCAATTAGAAGAAGTCGTTATTAAAATTAAAGAGACTTTAAAAGATAATGGCATTGAATTTT TAGGGATTGGTGCTTATAGTTCTACAAGGTATCAAGAATATAAAGAATTCAGCGAAAAAAGCAAAGTTTTTAACTCGCTT GAGGAATTTCTAATGAAGTTAAATCAAAGGAGCGAGAAACAAAACGAAATTTTAGGATATTTATACGAGGTGCATTCCAT GTATGAAAAGGCTATTGAGCAAGACGCTAACCAATTCAAACGCTACCAAAGCGAATTGCATTCTGTTAGATTGGATTTGA TGCAAAAAGGCTTTGATGATTTTAGCGATAAAATTTTTAGAAGAATTGAGAATTTAGAAAAAGAATTTTCCGAGCAAGAG CGATCCAAAAGAGAGAGTTTAGCGCGATTGAATGAAGTGATTGACTTGTTTAAAGAAGGTATTGATAAGGTTTTTGATCG CGTGAGCGCTTTCACTTGGGAAAAATACAAAGAACAAAATGACGATGAAGAGGACGATGATTGA
Upstream 100 bases:
>100_bases AACTTAAAGAAAACATGCAAAATTTGCAAAATCAAGTTCAAAACAAAGAGCAATCCATCGCTCAATTAGATGCACAAATC CAAGCTTTAAAGGGGATTCA
Downstream 100 bases:
>100_bases AGAAAACTACAAAGAAGAGCGTTACACCGAAAGGGTGAATCAAGGCGGTGTATGGGGAAGCTTTAAAAGAAAATTTTTGA GTTGGGCTGATGATGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSVNFFKGIFNDNSRAENHQDNHQNNHQVGLKERYDLIARILNARIENEGLEEYQSVLDNEFLEFASGVDSLKEKEIALL TLQEIQKELQLVASYPSLFQKTIVAVGGGFSAGKSTFLNNLLGLKLKLPEDMNPTTAIPTYCLKGKREVLMGFSQNGGMV ELPHLAFDHQFLNSLGFNLKEIMPFMLLSAPSVPFEFLCFIDTPGFNSAKQGYTGGDKEASKESLKHAKHILWLISCESG EIHEDDLEYLQELYEEGKQVFIVLSRADRRTKRQLEEVVIKIKETLKDNGIEFLGIGAYSSTRYQEYKEFSEKSKVFNSL EEFLMKLNQRSEKQNEILGYLYEVHSMYEKAIEQDANQFKRYQSELHSVRLDLMQKGFDDFSDKIFRRIENLEKEFSEQE RSKRESLARLNEVIDLFKEGIDKVFDRVSAFTWEKYKEQNDDEEDDD
Sequences:
>Translated_447_residues MSVNFFKGIFNDNSRAENHQDNHQNNHQVGLKERYDLIARILNARIENEGLEEYQSVLDNEFLEFASGVDSLKEKEIALL TLQEIQKELQLVASYPSLFQKTIVAVGGGFSAGKSTFLNNLLGLKLKLPEDMNPTTAIPTYCLKGKREVLMGFSQNGGMV ELPHLAFDHQFLNSLGFNLKEIMPFMLLSAPSVPFEFLCFIDTPGFNSAKQGYTGGDKEASKESLKHAKHILWLISCESG EIHEDDLEYLQELYEEGKQVFIVLSRADRRTKRQLEEVVIKIKETLKDNGIEFLGIGAYSSTRYQEYKEFSEKSKVFNSL EEFLMKLNQRSEKQNEILGYLYEVHSMYEKAIEQDANQFKRYQSELHSVRLDLMQKGFDDFSDKIFRRIENLEKEFSEQE RSKRESLARLNEVIDLFKEGIDKVFDRVSAFTWEKYKEQNDDEEDDD >Mature_446_residues SVNFFKGIFNDNSRAENHQDNHQNNHQVGLKERYDLIARILNARIENEGLEEYQSVLDNEFLEFASGVDSLKEKEIALLT LQEIQKELQLVASYPSLFQKTIVAVGGGFSAGKSTFLNNLLGLKLKLPEDMNPTTAIPTYCLKGKREVLMGFSQNGGMVE LPHLAFDHQFLNSLGFNLKEIMPFMLLSAPSVPFEFLCFIDTPGFNSAKQGYTGGDKEASKESLKHAKHILWLISCESGE IHEDDLEYLQELYEEGKQVFIVLSRADRRTKRQLEEVVIKIKETLKDNGIEFLGIGAYSSTRYQEYKEFSEKSKVFNSLE EFLMKLNQRSEKQNEILGYLYEVHSMYEKAIEQDANQFKRYQSELHSVRLDLMQKGFDDFSDKIFRRIENLEKEFSEQER SKRESLARLNEVIDLFKEGIDKVFDRVSAFTWEKYKEQNDDEEDDD
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51796; Mature: 51665
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNFFKGIFNDNSRAENHQDNHQNNHQVGLKERYDLIARILNARIENEGLEEYQSVLDN CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EFLEFASGVDSLKEKEIALLTLQEIQKELQLVASYPSLFQKTIVAVGGGFSAGKSTFLNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LLGLKLKLPEDMNPTTAIPTYCLKGKREVLMGFSQNGGMVELPHLAFDHQFLNSLGFNLK HHCCEEECCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCHH EIMPFMLLSAPSVPFEFLCFIDTPGFNSAKQGYTGGDKEASKESLKHAKHILWLISCESG HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCC EIHEDDLEYLQELYEEGKQVFIVLSRADRRTKRQLEEVVIKIKETLKDNGIEFLGIGAYS CCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC STRYQEYKEFSEKSKVFNSLEEFLMKLNQRSEKQNEILGYLYEVHSMYEKAIEQDANQFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYQSELHSVRLDLMQKGFDDFSDKIFRRIENLEKEFSEQERSKRESLARLNEVIDLFKEG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDKVFDRVSAFTWEKYKEQNDDEEDDD HHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SVNFFKGIFNDNSRAENHQDNHQNNHQVGLKERYDLIARILNARIENEGLEEYQSVLDN CCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EFLEFASGVDSLKEKEIALLTLQEIQKELQLVASYPSLFQKTIVAVGGGFSAGKSTFLNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LLGLKLKLPEDMNPTTAIPTYCLKGKREVLMGFSQNGGMVELPHLAFDHQFLNSLGFNLK HHCCEEECCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCHH EIMPFMLLSAPSVPFEFLCFIDTPGFNSAKQGYTGGDKEASKESLKHAKHILWLISCESG HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCC EIHEDDLEYLQELYEEGKQVFIVLSRADRRTKRQLEEVVIKIKETLKDNGIEFLGIGAYS CCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC STRYQEYKEFSEKSKVFNSLEEFLMKLNQRSEKQNEILGYLYEVHSMYEKAIEQDANQFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYQSELHSVRLDLMQKGFDDFSDKIFRRIENLEKEFSEQERSKRESLARLNEVIDLFKEG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDKVFDRVSAFTWEKYKEQNDDEEDDD HHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA