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Identifier: 15645560

GI number: 15645560

Start: 1004929

End: 1005306

Strand: Reverse

Name: Not Available

Synonym: HP0944

Alternate gene names: 15645560

Gene position: 1005306-1004929 (Counterclockwise)

Preceding gene: 15645561

Following gene: 15645559

Centisome position: 60.27

GC content: 41.8

Gene sequence:

>378_bases
ATGAAAGAAGTCATCCATTCAACGCTAGCCCCAAAGGCTATAGGCCCTTACTCTCAAGCTATCGCTACTAACGATCTTGT
TTTTGTCTCTGGGCAATTAGGCATTGATGTAAGCACCGGCGAGTTTAAAGGCGCAGACATTCATTCTCAAACCACGCAAT
CCATGGAAAATATCAAAGCGATTTTAAAAGAAGCAGGGTTAGGGATGGATAGCGTGGTTAAAACGACTATTTTATTGAAA
AGTTTAGACGATTTTGCGGTGGTGAATGGAATCTATGGGAGTTATTTTACAGAGCCTTATCCGGCCAGAGCGACCTTTCA
AGTGGCTAAACTGCCTAAAGACGCTTTAGTAGAAATTGAAGCGATAGCCATTAAGTAA

Upstream 100 bases:

>100_bases
AGATGAAAATTCATGGCGTTTTGCGCTCATTTTTTATTTCTTTATTAATTTGATTGCATAATAATAGCTGACATAACACA
TCATCATAGGAGTTTCAATC

Downstream 100 bases:

>100_bases
TTTATTAAAGGGACTATCAGCATGAAAAAAGAGGTCGTGGTCATAGGCGGTGGGATTGTAGGGCTTTCTTGTGCGTATTC
TATGCACAAGTTAGGGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLK
SLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK

Sequences:

>Translated_125_residues
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLK
SLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK
>Mature_125_residues
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLK
SLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIAIK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=125, Percent_Identity=45.6, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI87082396, Length=128, Percent_Identity=45.3125, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI87082213, Length=128, Percent_Identity=44.53125, Blast_Score=116, Evalue=5e-28,
Organism=Escherichia coli, GI1787245, Length=122, Percent_Identity=30.327868852459, Blast_Score=63, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71982075, Length=123, Percent_Identity=52.8455284552846, Blast_Score=135, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71982068, Length=123, Percent_Identity=52.8455284552846, Blast_Score=135, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI25148896, Length=123, Percent_Identity=52.8455284552846, Blast_Score=135, Evalue=4e-33,
Organism=Saccharomyces cerevisiae, GI6322138, Length=121, Percent_Identity=34.7107438016529, Blast_Score=83, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320899, Length=100, Percent_Identity=37, Blast_Score=70, Evalue=9e-14,
Organism=Drosophila melanogaster, GI19921376, Length=124, Percent_Identity=44.3548387096774, Blast_Score=117, Evalue=3e-27,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13374; Mature: 13374

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA
CHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHH
ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE
HHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCHHHHCCCCCCCCCEEHHHHCCHHHHEEEE
AIAIK
EEEEC
>Mature Secondary Structure
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKA
CHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHH
ILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIE
HHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCHHHHCCCCCCCCCEEHHHHCCHHHHEEEE
AIAIK
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]