| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645553
GI number: 15645553
Start: 998323
End: 999117
Strand: Reverse
Name: Not Available
Synonym: HP0937
Alternate gene names: NA
Gene position: 999117-998323 (Counterclockwise)
Preceding gene: 15645554
Following gene: 15645552
Centisome position: 59.9
GC content: 31.7
Gene sequence:
>795_bases TTGAGCTATTCTGATTTATTAATGTCTATTTTGACAGCAAGCTTTTCAAGCGATATTAGAGAAAAAATGAATGAGCTAGT AGATACCTTAAAAGACAAAGGCTTTTCAAACATGGGGCAAGACCAAGTGCTAAAAACTTGCTTGCTTCTCATTGGTAAAG ACACTACTTTTGAATTAAAAAATTTCAATAAAAAAAATATTAAAGAGATTGAAGAAAATTGGGAAAAAATTACAGAAAGC ATTTATGACGCTGCAAAACTATTAGAAACTTTTGGTTATGTGGGCTATTTAGGTTCAGCTTATATTTTATCCAGTGTAGC CTATTTTTATTTTTTAAATCAAAAAATGGATAAAAACGATGAAGAACAAGCCCTAAAATTTGTCCGTAACGCTCAAATCA CGAGTTATTTTACTCCTTCAACGGATACAAAATTAAACAACATAGACAATAGCATGAAGGATGTGAAAATCTTTGAATCA TTCAACCATAATTTAGCCAAACACCAAACAAGCCCTTTAAAAATCACTAACGATGCGATAGAAGAAATGATGTGTTCTAG TAGCCATGCTCGAGTCTTTCCTATTTTACAAATCTTATACCCACACCTGAAGTATAAAACCACCACTTTTCATATAGACC ATATTTATCCAAAGTCCAAGTTTAAAAAGGAAAATAAAAAATTGGATAAAGATTTCTATGGGTGGGGGAATTATTTATTC AATCTCCAGCTTTTAGAAGGTGCAGAAAACCAAGCCAAAAAGGATAAAAACCCTGAGATATGGCTCAAAGAATAA
Upstream 100 bases:
>100_bases ATTGTGGCCAACAGCGTTTAACCTCGCTTTATATCGGGCTTAAAGGCACTAGAACAAAGTTTTAAATATTTTTATCCGTG TCAATAGCGGCGGGGTTAAG
Downstream 100 bases:
>100_bases TATAAAGATGAGCGAGCCATAGAAGAGTATAAAAAAAGAAATTATATTGACCCTAATTTAAAATTAGAATGGGAAAACAT AAAGGAATTTCGTGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSYSDLLMSILTASFSSDIREKMNELVDTLKDKGFSNMGQDQVLKTCLLLIGKDTTFELKNFNKKNIKEIEENWEKITES IYDAAKLLETFGYVGYLGSAYILSSVAYFYFLNQKMDKNDEEQALKFVRNAQITSYFTPSTDTKLNNIDNSMKDVKIFES FNHNLAKHQTSPLKITNDAIEEMMCSSSHARVFPILQILYPHLKYKTTTFHIDHIYPKSKFKKENKKLDKDFYGWGNYLF NLQLLEGAENQAKKDKNPEIWLKE
Sequences:
>Translated_264_residues MSYSDLLMSILTASFSSDIREKMNELVDTLKDKGFSNMGQDQVLKTCLLLIGKDTTFELKNFNKKNIKEIEENWEKITES IYDAAKLLETFGYVGYLGSAYILSSVAYFYFLNQKMDKNDEEQALKFVRNAQITSYFTPSTDTKLNNIDNSMKDVKIFES FNHNLAKHQTSPLKITNDAIEEMMCSSSHARVFPILQILYPHLKYKTTTFHIDHIYPKSKFKKENKKLDKDFYGWGNYLF NLQLLEGAENQAKKDKNPEIWLKE >Mature_263_residues SYSDLLMSILTASFSSDIREKMNELVDTLKDKGFSNMGQDQVLKTCLLLIGKDTTFELKNFNKKNIKEIEENWEKITESI YDAAKLLETFGYVGYLGSAYILSSVAYFYFLNQKMDKNDEEQALKFVRNAQITSYFTPSTDTKLNNIDNSMKDVKIFESF NHNLAKHQTSPLKITNDAIEEMMCSSSHARVFPILQILYPHLKYKTTTFHIDHIYPKSKFKKENKKLDKDFYGWGNYLFN LQLLEGAENQAKKDKNPEIWLKE
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30754; Mature: 30623
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSDLLMSILTASFSSDIREKMNELVDTLKDKGFSNMGQDQVLKTCLLLIGKDTTFELK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEHHH NFNKKNIKEIEENWEKITESIYDAAKLLETFGYVGYLGSAYILSSVAYFYFLNQKMDKND CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EEQALKFVRNAQITSYFTPSTDTKLNNIDNSMKDVKIFESFNHNLAKHQTSPLKITNDAI HHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECHHHH EEMMCSSSHARVFPILQILYPHLKYKTTTFHIDHIYPKSKFKKENKKLDKDFYGWGNYLF HHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHE NLQLLEGAENQAKKDKNPEIWLKE EEHHHHCCCHHHHCCCCCCCEECC >Mature Secondary Structure SYSDLLMSILTASFSSDIREKMNELVDTLKDKGFSNMGQDQVLKTCLLLIGKDTTFELK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEHHH NFNKKNIKEIEENWEKITESIYDAAKLLETFGYVGYLGSAYILSSVAYFYFLNQKMDKND CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EEQALKFVRNAQITSYFTPSTDTKLNNIDNSMKDVKIFESFNHNLAKHQTSPLKITNDAI HHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECHHHH EEMMCSSSHARVFPILQILYPHLKYKTTTFHIDHIYPKSKFKKENKKLDKDFYGWGNYLF HHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHE NLQLLEGAENQAKKDKNPEIWLKE EEHHHHCCCHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA