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Identifier: 15645517

GI number: 15645517

Start: 951858

End: 952091

Strand: Reverse

Name: Not Available

Synonym: HP0899

Alternate gene names: 15645517

Gene position: 952091-951858 (Counterclockwise)

Preceding gene: 15645518

Following gene: 15645516

Centisome position: 57.08

GC content: 42.74

Gene sequence:

>234_bases
ATGTGTTTAGCGATCCCCTCTAAAGTCATAGCCATTAAGGATAATGTGGTGCTTTTGGAAACTTTGGGCGTTCAAAGAGA
GGCGAGCTTGGATTTAATGGGCGAGTCCGTTAAAGTGGGCGATTATGTGCTGTTGCACATCGGCTATGTGATGAGCAAGA
TTGATGAAAAAGAAGCCCTAGAATCCATTGAGCTTTATCAAGAAATGATCGCCAGAATGAACGAAACGCAATAA

Upstream 100 bases:

>100_bases
TTTTTTTAATGAGCTCTAAAGACCCTAAAAGTTTGGAAGATTTTAAAAATTTCCTTCTAGAAAAAAAGCGTGAAAATTAC
CAGTCCACGCATTCGTTTTA

Downstream 100 bases:

>100_bases
TAACAATGAGCGTTGATCACCTCATTTCGCCCTTTAGAGACAAGCGAACCCTTTTAGCGCTCTCTAATGCAATCAAAAAA
CTCGCTTTCAAACTTGAAAA

Product: hydrogenase expression/formation protein (hypC)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MCLAIPSKVIAIKDNVVLLETLGVQREASLDLMGESVKVGDYVLLHIGYVMSKIDEKEALESIELYQEMIARMNETQ

Sequences:

>Translated_77_residues
MCLAIPSKVIAIKDNVVLLETLGVQREASLDLMGESVKVGDYVLLHIGYVMSKIDEKEALESIELYQEMIARMNETQ
>Mature_77_residues
MCLAIPSKVIAIKDNVVLLETLGVQREASLDLMGESVKVGDYVLLHIGYVMSKIDEKEALESIELYQEMIARMNETQ

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8627; Mature: 8627

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAIPSKVIAIKDNVVLLETLGVQREASLDLMGESVKVGDYVLLHIGYVMSKIDEKEAL
CCCCCCCEEEEEECCEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
ESIELYQEMIARMNETQ
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCLAIPSKVIAIKDNVVLLETLGVQREASLDLMGESVKVGDYVLLHIGYVMSKIDEKEAL
CCCCCCCEEEEEECCEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
ESIELYQEMIARMNETQ
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]