| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15645467
GI number: 15645467
Start: 899837
End: 900733
Strand: Reverse
Name: Not Available
Synonym: HP0848
Alternate gene names: NA
Gene position: 900733-899837 (Counterclockwise)
Preceding gene: 15645468
Following gene: 15645466
Centisome position: 54.01
GC content: 34.34
Gene sequence:
>897_bases ATGTTTTGCTTTGAAAATTTGAATATTCAAAATGATATAAAAAGTAAAAGTTTTGGAGGAATAGTTAAAAGTATATCAAT GAACGATTTACAACAAATAACCATCCCCATCCCACCCCTAGAGATCCAACAAGAGATCGTTAAGATTTTGGACGCTTTCA CAGAATTAAACACAGAATTAAACACAGAATTAAAAGCGCGCAAAAAGCAATATGAGTATTACCAAAACATGCTTTTAGAC TTTAACGATATTAATCAAAACCACAAAGACGCCAAAATAAAAACCTACCCTAAACGCTTGAAAACCTTACTCCACACTTT AGCGCCTAAGGGGGTGGAGTTTAGGAAATTGGGGGAGGTGTGTGAAAGCACAAATAAAAAAACACTCAAAATAAGCGAAG TAAGTGAAGTAAAAAATAAGGGAATGTATCCAGTGATAAATTCAGGGAGGGATTTGTATGGTTATTACCATGATTTTAAC AATGATGGAGAAAATATAACTATTGCATCTAGGGGAGAATATGCAGGATTTATAAACTATTTCAATGAAAAATTTTTTGC AGGGGGTCTATGTTATCCCTATAAAGTTAAAGACACTAACGAGCTTTTAACAAAATTTTTATACTTTTATCTCAAAACTA ATGAAATCCAAATTATGGAGAACCTTGTTTTTCGTGGCAGTATCCCCGCACTCAATAAAGCAGATATTGAAACTTTAACA ATCCCCATCCCACCTCTAGAGATCCAACAAGAGATCGTTAAGATTTTGGATCAATTTTCAGCCCTAACCACCGATTTATT AGCCGGTATCCCCGCTGAAATAAAAGCCCGAAAAAAGCAATACGAATATTACCGAGAAAAACTACTGACCTTCAAACCTC TCCAAAACAAGGAATAA
Upstream 100 bases:
>100_bases AAAAGTATCAATTATTAAAGAAAATCCAAATAATTGGGCGATTAAAGAGGGAATTTATTCAATCAAACCAAATAAAAAAA TAGTATTTCCAAGATTTTTA
Downstream 100 bases:
>100_bases CATGAGTTACGAAACGATCGCAGAAAGCAATGAAAGCACGGTAGTAGCGGAATTTCATAGCAGTAATGAAAAAAAAGCGC TTATGAGAGCGAAGCAGAGC
Product: type I restriction enzyme S protein (hsdS)
Products: NA
Alternate protein names: S.MpnORFCP; Type I restriction enzyme specificity protein MPN_365; S protein [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MFCFENLNIQNDIKSKSFGGIVKSISMNDLQQITIPIPPLEIQQEIVKILDAFTELNTELNTELKARKKQYEYYQNMLLD FNDINQNHKDAKIKTYPKRLKTLLHTLAPKGVEFRKLGEVCESTNKKTLKISEVSEVKNKGMYPVINSGRDLYGYYHDFN NDGENITIASRGEYAGFINYFNEKFFAGGLCYPYKVKDTNELLTKFLYFYLKTNEIQIMENLVFRGSIPALNKADIETLT IPIPPLEIQQEIVKILDQFSALTTDLLAGIPAEIKARKKQYEYYREKLLTFKPLQNKE
Sequences:
>Translated_298_residues MFCFENLNIQNDIKSKSFGGIVKSISMNDLQQITIPIPPLEIQQEIVKILDAFTELNTELNTELKARKKQYEYYQNMLLD FNDINQNHKDAKIKTYPKRLKTLLHTLAPKGVEFRKLGEVCESTNKKTLKISEVSEVKNKGMYPVINSGRDLYGYYHDFN NDGENITIASRGEYAGFINYFNEKFFAGGLCYPYKVKDTNELLTKFLYFYLKTNEIQIMENLVFRGSIPALNKADIETLT IPIPPLEIQQEIVKILDQFSALTTDLLAGIPAEIKARKKQYEYYREKLLTFKPLQNKE >Mature_298_residues MFCFENLNIQNDIKSKSFGGIVKSISMNDLQQITIPIPPLEIQQEIVKILDAFTELNTELNTELKARKKQYEYYQNMLLD FNDINQNHKDAKIKTYPKRLKTLLHTLAPKGVEFRKLGEVCESTNKKTLKISEVSEVKNKGMYPVINSGRDLYGYYHDFN NDGENITIASRGEYAGFINYFNEKFFAGGLCYPYKVKDTNELLTKFLYFYLKTNEIQIMENLVFRGSIPALNKADIETLT IPIPPLEIQQEIVKILDQFSALTTDLLAGIPAEIKARKKQYEYYREKLLTFKPLQNKE
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 34561; Mature: 34561
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCFENLNIQNDIKSKSFGGIVKSISMNDLQQITIPIPPLEIQQEIVKILDAFTELNTEL CCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHH NTELKARKKQYEYYQNMLLDFNDINQNHKDAKIKTYPKRLKTLLHTLAPKGVEFRKLGEV HHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH CESTNKKTLKISEVSEVKNKGMYPVINSGRDLYGYYHDFNNDGENITIASRGEYAGFINY HHCCCCCEEEEHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHH FNEKFFAGGLCYPYKVKDTNELLTKFLYFYLKTNEIQIMENLVFRGSIPALNKADIETLT HHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE IPIPPLEIQQEIVKILDQFSALTTDLLAGIPAEIKARKKQYEYYREKLLTFKPLQNKE ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFCFENLNIQNDIKSKSFGGIVKSISMNDLQQITIPIPPLEIQQEIVKILDAFTELNTEL CCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHH NTELKARKKQYEYYQNMLLDFNDINQNHKDAKIKTYPKRLKTLLHTLAPKGVEFRKLGEV HHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH CESTNKKTLKISEVSEVKNKGMYPVINSGRDLYGYYHDFNNDGENITIASRGEYAGFINY HHCCCCCEEEEHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHH FNEKFFAGGLCYPYKVKDTNELLTKFLYFYLKTNEIQIMENLVFRGSIPALNKADIETLT HHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE IPIPPLEIQQEIVKILDQFSALTTDLLAGIPAEIKARKKQYEYYREKLLTFKPLQNKE ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]