| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645452
GI number: 15645452
Start: 885112
End: 885990
Strand: Reverse
Name: Not Available
Synonym: HP0833
Alternate gene names: NA
Gene position: 885990-885112 (Counterclockwise)
Preceding gene: 15645462
Following gene: 15645451
Centisome position: 53.12
GC content: 36.06
Gene sequence:
>879_bases TTGTTTTTAGTCAAAAAAATAGGCGTGGTAATAGTGGTTTTAATAGGCTTTTTAGCTTGCTCGCAAGAGAGGTTTATCCA GTTGCAAAAAAAAGCCCAAGAGCAAGAAAATGACGGCTCTAAACGCCCTAGCTATGTGGATTCGGATTATGAAGTCTTTA GCGAAACGATTTTTTTACAAAACATGGTGTATCAGCCTACAGAAGAAAGAGATTCTTTCGCCCAACTGACTAAAGATGAA AACGATTCTTTTAACCCCGAAACTTCTGTGATTTTATTGAATGAACCAAGCGATAGCGATACAAAAAACCCGCCCTTGAA CCAAAATGAGTCTAATACTAACACTGCCAATAACGATACAAAAAACCCGTTCCTTTACAAACCGAAAAGAAAAACAAAAG ATCCAAAGCTCATTGAATATTCCCAACAAAATTTCTACCCCCTAAAGGATGGGGATATTATGATGAGTAAAGAAGGGGAT CAATGGCTGATAGAAATCAAATCCAAAGCCTTGAAGCGTTTTTTAAAAGATCAAAACGATAAAGATCGCCAGATCCAAAC TTTCACTTTTAATGACACTAAAACGCAAATCGCGCAATTTAAGGGCAAAATTTCTTCGTATGTTTATACCACCAATAACA GCGATTTGAGTTTAAGGCCTTTTTATGAATCCTTTCTCTTAGAAAAAAAGAGCGATGATTTTTATACGATAGGGGATAAG GCTTTAGACGCCATTGAGATTTCAAAGTGTCAAATGGTGTTAAAAAAGCATTCAACCGATAAATTAGACAGCCAGCATAA AGCCATCAGTATTGATTTGGATTTTAAAAAAGAGCGCTTTAAGAGCAATACGGAACTTTTTTTAGAATGCCAAAGCTAG
Upstream 100 bases:
>100_bases TAAAGTTTTATGGCTTGTATTCATCTTTTTTATCGCTTCAATTTAATCAAAATTAGATTACAATATTATAGTTATTTAAA GCTTAAATAAGGGTCTAGCG
Downstream 100 bases:
>100_bases GCTTTTGTTACAATAATTTAGATTTTTTAGCTAGCATGTTAGCAATTCATTAAGGCATGGATATTGTTAAAAAGTAAGCT AAGGAGTGTTTATGTGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MFLVKKIGVVIVVLIGFLACSQERFIQLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPTEERDSFAQLTKDE NDSFNPETSVILLNEPSDSDTKNPPLNQNESNTNTANNDTKNPFLYKPKRKTKDPKLIEYSQQNFYPLKDGDIMMSKEGD QWLIEIKSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIGDK ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSNTELFLECQS
Sequences:
>Translated_292_residues MFLVKKIGVVIVVLIGFLACSQERFIQLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPTEERDSFAQLTKDE NDSFNPETSVILLNEPSDSDTKNPPLNQNESNTNTANNDTKNPFLYKPKRKTKDPKLIEYSQQNFYPLKDGDIMMSKEGD QWLIEIKSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIGDK ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSNTELFLECQS >Mature_292_residues MFLVKKIGVVIVVLIGFLACSQERFIQLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPTEERDSFAQLTKDE NDSFNPETSVILLNEPSDSDTKNPPLNQNESNTNTANNDTKNPFLYKPKRKTKDPKLIEYSQQNFYPLKDGDIMMSKEGD QWLIEIKSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIGDK ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSNTELFLECQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33932; Mature: 33932
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLVKKIGVVIVVLIGFLACSQERFIQLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQ CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH NMVYQPTEERDSFAQLTKDENDSFNPETSVILLNEPSDSDTKNPPLNQNESNTNTANNDT HHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC KNPFLYKPKRKTKDPKLIEYSQQNFYPLKDGDIMMSKEGDQWLIEIKSKALKRFLKDQND CCCEEECCCCCCCCCCEEEECCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC KDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIGDK CCCEEEEEEECCHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCCCCEEEECCH ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSNTELFLECQS HHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCHHHCCCCCEEEEEECC >Mature Secondary Structure MFLVKKIGVVIVVLIGFLACSQERFIQLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQ CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH NMVYQPTEERDSFAQLTKDENDSFNPETSVILLNEPSDSDTKNPPLNQNESNTNTANNDT HHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC KNPFLYKPKRKTKDPKLIEYSQQNFYPLKDGDIMMSKEGDQWLIEIKSKALKRFLKDQND CCCEEECCCCCCCCCCEEEECCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC KDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIGDK CCCEEEEEEECCHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCCCCEEEECCH ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSNTELFLECQS HHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA