| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645429
GI number: 15645429
Start: 864477
End: 865079
Strand: Reverse
Name: Not Available
Synonym: HP0810
Alternate gene names: 15645429
Gene position: 865079-864477 (Counterclockwise)
Preceding gene: 15645430
Following gene: 15645428
Centisome position: 51.87
GC content: 34.99
Gene sequence:
>603_bases ATGCCAAATCATCAGCCAGTAAAAAAATTTAAGATTATTGGGGGGGCTTGTAAGGGATTAGGCTTGAATTTGCCTAACAT TTCTAGCACGCGCCCCACCAAAGCGATCGTAAGAGAGTCGTTTTTTAACACCTTGCAAGCAGAAATTAATGGAGCGCATT TTATAGAAGTGTTTTCAGGCAGCGCTTCTATGGGTTTAGAGGCTTTGAGTAGGGGGGCTAAAAGTGCGGTGTTTTTTGAA CAAAACAAAAGCGCTTATAAGACGCTTTTAGAAAATATTTCCCTTTTTAAAAACCGCTTGAAAAAAGAAATGGAAATTCA AACCTTTTTAGATGACGCTTTCAAGCTTTTGCCCACGCTGTGTTTAAAAAATGGCGTTTTGAATATTATTTATTTGGATC CTCCTTTTGAAACAAGTGGGTTTTTAGGGATTTATGAAAAGTGTTTTCAAGCTTTAGAAAGGTTATTGAAACGCTTTAAT CCAAAAAATCTTTTAGTGGTTTTTGAGCATGAAAGCATGCATGAAATGCCTAAAAGTCTTGTAACTTTAGCTATAATCAA ACAAAAAAAATTTGGAAAAACCACTTTAACTTATTTTCAATAG
Upstream 100 bases:
>100_bases TTTATCGCGCTTTAAAGACGAGCGAAAAACCTTGCGAAGAAATCCAATTTTCTAAAGAGCAAAAGATTAAGCAATTACTA GAAGAATACACCCACAAATT
Downstream 100 bases:
>100_bases GAATAGGCATGGCAGAAGAACAAGAAAATACCGCGCAACAACCCCCCAAAAAAAGCAAAGCCCTTTTATTTGTCATTATT GGAAGCGTGTTAGTGATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: 16S rRNA m2G966 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPNHQPVKKFKIIGGACKGLGLNLPNISSTRPTKAIVRESFFNTLQAEINGAHFIEVFSGSASMGLEALSRGAKSAVFFE QNKSAYKTLLENISLFKNRLKKEMEIQTFLDDAFKLLPTLCLKNGVLNIIYLDPPFETSGFLGIYEKCFQALERLLKRFN PKNLLVVFEHESMHEMPKSLVTLAIIKQKKFGKTTLTYFQ
Sequences:
>Translated_200_residues MPNHQPVKKFKIIGGACKGLGLNLPNISSTRPTKAIVRESFFNTLQAEINGAHFIEVFSGSASMGLEALSRGAKSAVFFE QNKSAYKTLLENISLFKNRLKKEMEIQTFLDDAFKLLPTLCLKNGVLNIIYLDPPFETSGFLGIYEKCFQALERLLKRFN PKNLLVVFEHESMHEMPKSLVTLAIIKQKKFGKTTLTYFQ >Mature_199_residues PNHQPVKKFKIIGGACKGLGLNLPNISSTRPTKAIVRESFFNTLQAEINGAHFIEVFSGSASMGLEALSRGAKSAVFFEQ NKSAYKTLLENISLFKNRLKKEMEIQTFLDDAFKLLPTLCLKNGVLNIIYLDPPFETSGFLGIYEKCFQALERLLKRFNP KNLLVVFEHESMHEMPKSLVTLAIIKQKKFGKTTLTYFQ
Specific function: Specifically methylates the guanosine in position 966 of 16S rRNA in the assembled 30S particle [H]
COG id: COG0742
COG function: function code L; N6-adenine-specific methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]
Homologues:
Organism=Escherichia coli, GI1789875, Length=201, Percent_Identity=29.8507462686567, Blast_Score=87, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004398 [H]
Pfam domain/function: PF03602 Cons_hypoth95 [H]
EC number: =2.1.1.171 [H]
Molecular weight: Translated: 22597; Mature: 22466
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNHQPVKKFKIIGGACKGLGLNLPNISSTRPTKAIVRESFFNTLQAEINGAHFIEVFSG CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC SASMGLEALSRGAKSAVFFEQNKSAYKTLLENISLFKNRLKKEMEIQTFLDDAFKLLPTL CHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLKNGVLNIIYLDPPFETSGFLGIYEKCFQALERLLKRFNPKNLLVVFEHESMHEMPKSL HHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHH VTLAIIKQKKFGKTTLTYFQ HHHHHHHHHHCCCCEECCCC >Mature Secondary Structure PNHQPVKKFKIIGGACKGLGLNLPNISSTRPTKAIVRESFFNTLQAEINGAHFIEVFSG CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC SASMGLEALSRGAKSAVFFEQNKSAYKTLLENISLFKNRLKKEMEIQTFLDDAFKLLPTL CHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLKNGVLNIIYLDPPFETSGFLGIYEKCFQALERLLKRFNPKNLLVVFEHESMHEMPKSL HHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHH VTLAIIKQKKFGKTTLTYFQ HHHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]