| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645409
GI number: 15645409
Start: 845540
End: 846835
Strand: Reverse
Name: Not Available
Synonym: HP0790
Alternate gene names: 15645409
Gene position: 846835-845540 (Counterclockwise)
Preceding gene: 15645410
Following gene: 15645408
Centisome position: 50.77
GC content: 35.49
Gene sequence:
>1296_bases ATGCATAAAATAGAGCGCTTACTCCAAACTCTAGCGCCTAAGGGGGTGGAGTTTAAAACGCTTGAAGAGGTTTTTGAAAT TAAAAATGGTTACACCCCATCAAAAAACAATCCTGAATTTTGGAAAAATGGGACTATCCCTTGGTTTAGAATGGAAGACA TTAGAGAAAATGGGAGGATTTTAAAAGACTCTATCCAACACATTACCCCAAAGGCTTTAAAGGGTAAGAAATTATTCCCT AAAAATTCTATTATTATTTCTACGAAAGCAACCATAGGAGAGCATGCCCTTTTAATCGTTGATTCGTTAGCGAATCAACA ATTCACTTTTTTAAGCAAAAAAGCGAATTGTGATCTTGCTTTAGACATGAAATTCTTTTTTTATCAATGTTTTCTTTTGG GGGAATGGTGCAAAAATAATATTAATGTTTCAGGTTTTGCTTCTGTGGATATGACTGCTTTTAAAAAATATAAGTTCCCC ATCCCACCCCTAGAGATCCAACAAGAGATCGTTAAGATTTTGGACGCTTTCACAGAATTAAACACAGAATTAAACACAGA ATTAAACACAGAATTAAAAGCGCGCAAAAAGCAATATGAATATTACCAAAACATGCTTTTAGACTTTAACGATATTAACC AAAGCCACAAAGACGCCAAAGAAAGATTGGCGCAAAAAACCTACCCTAAACGCTTGAAAACCTTACTCCAAACTCTAGCG CCTAAGGGGGTGGAGTTTAGGAAGTTGGGGGAGGTGTGTGAAATTTTAGATAATCGGCGTATCCCAATTGCGAAAAATAA AAGAAATCCGGGAATTTATCCTTATTATGGAGCAAATGGAATTCAAGATTATATTGATAGCTATATTTTTGATGGGGATT TTGTGCTAGTTGGTGAAGATGGGAGCGTTATCAATAAGGATAATACTCCTGTTGTGAATTGGGCAAGCGGAAAAATATGG GTGAACAATCATGCTCATGTGCTTCAAACAAAAAATGAACTAAAATTAAAGTTTTTATATTTTTATTTACAAACGATAGA TGTTAGCTATTGTGTTGCTGGAACTCCGCCAAAAATCAACCAAGAAAATTTAAAAAAAATAGCAATCCCCATCCCACCCC TAGAGATCCAACAAGAGATCGTTAAGATTTTGGATCAATTTTCAATTTTAACCACCGATTTATTAGCCGGTATCCCCGCT GAAATAAAAGCGAGAAAAAAGCAATACGAATATTACCGAGAAAAATTATTGACCTTCAAGCCCCTAACCCCACTAAATAG CAAAGAGCTTGCGTAA
Upstream 100 bases:
>100_bases GCGATGTGGGGGTTACGCTTTTAGCCTTAGCCAATTCCATGCGCGCGATGAGAGCTTAAAGCCTTGATCGTATCATTAGC CATTTAGAAAGGGGGGCAAA
Downstream 100 bases:
>100_bases GCAAGCGATAGCCTCTTGAAAAAAAGCGGTCTTGGGGGGTTAGGGGGATCTTAAGGGGGTTAAGGGGGGTATTATCGCAA AATACCCCCCTATCCCCTTA
Product: anti-codon nuclease masking agent (prrB)
Products: NA
Alternate protein names: S.EcoprrI; Type I restriction enzyme EcoprrI specificity protein; S protein [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MHKIERLLQTLAPKGVEFKTLEEVFEIKNGYTPSKNNPEFWKNGTIPWFRMEDIRENGRILKDSIQHITPKALKGKKLFP KNSIIISTKATIGEHALLIVDSLANQQFTFLSKKANCDLALDMKFFFYQCFLLGEWCKNNINVSGFASVDMTAFKKYKFP IPPLEIQQEIVKILDAFTELNTELNTELNTELKARKKQYEYYQNMLLDFNDINQSHKDAKERLAQKTYPKRLKTLLQTLA PKGVEFRKLGEVCEILDNRRIPIAKNKRNPGIYPYYGANGIQDYIDSYIFDGDFVLVGEDGSVINKDNTPVVNWASGKIW VNNHAHVLQTKNELKLKFLYFYLQTIDVSYCVAGTPPKINQENLKKIAIPIPPLEIQQEIVKILDQFSILTTDLLAGIPA EIKARKKQYEYYREKLLTFKPLTPLNSKELA
Sequences:
>Translated_431_residues MHKIERLLQTLAPKGVEFKTLEEVFEIKNGYTPSKNNPEFWKNGTIPWFRMEDIRENGRILKDSIQHITPKALKGKKLFP KNSIIISTKATIGEHALLIVDSLANQQFTFLSKKANCDLALDMKFFFYQCFLLGEWCKNNINVSGFASVDMTAFKKYKFP IPPLEIQQEIVKILDAFTELNTELNTELNTELKARKKQYEYYQNMLLDFNDINQSHKDAKERLAQKTYPKRLKTLLQTLA PKGVEFRKLGEVCEILDNRRIPIAKNKRNPGIYPYYGANGIQDYIDSYIFDGDFVLVGEDGSVINKDNTPVVNWASGKIW VNNHAHVLQTKNELKLKFLYFYLQTIDVSYCVAGTPPKINQENLKKIAIPIPPLEIQQEIVKILDQFSILTTDLLAGIPA EIKARKKQYEYYREKLLTFKPLTPLNSKELA >Mature_431_residues MHKIERLLQTLAPKGVEFKTLEEVFEIKNGYTPSKNNPEFWKNGTIPWFRMEDIRENGRILKDSIQHITPKALKGKKLFP KNSIIISTKATIGEHALLIVDSLANQQFTFLSKKANCDLALDMKFFFYQCFLLGEWCKNNINVSGFASVDMTAFKKYKFP IPPLEIQQEIVKILDAFTELNTELNTELNTELKARKKQYEYYQNMLLDFNDINQSHKDAKERLAQKTYPKRLKTLLQTLA PKGVEFRKLGEVCEILDNRRIPIAKNKRNPGIYPYYGANGIQDYIDSYIFDGDFVLVGEDGSVINKDNTPVVNWASGKIW VNNHAHVLQTKNELKLKFLYFYLQTIDVSYCVAGTPPKINQENLKKIAIPIPPLEIQQEIVKILDQFSILTTDLLAGIPA EIKARKKQYEYYREKLLTFKPLTPLNSKELA
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 49769; Mature: 49769
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKIERLLQTLAPKGVEFKTLEEVFEIKNGYTPSKNNPEFWKNGTIPWFRMEDIRENGRI CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCC LKDSIQHITPKALKGKKLFPKNSIIISTKATIGEHALLIVDSLANQQFTFLSKKANCDLA HHHHHHHCCHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCEEEECCCCCCCEE LDMKFFFYQCFLLGEWCKNNINVSGFASVDMTAFKKYKFPIPPLEIQQEIVKILDAFTEL EHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NTELNTELNTELKARKKQYEYYQNMLLDFNDINQSHKDAKERLAQKTYPKRLKTLLQTLA CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PKGVEFRKLGEVCEILDNRRIPIAKNKRNPGIYPYYGANGIQDYIDSYIFDGDFVLVGED CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHEECCCEEEECCC GSVINKDNTPVVNWASGKIWVNNHAHVLQTKNELKLKFLYFYLQTIDVSYCVAGTPPKIN CCEECCCCCCEEEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCC QENLKKIAIPIPPLEIQQEIVKILDQFSILTTDLLAGIPAEIKARKKQYEYYREKLLTFK HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEC PLTPLNSKELA CCCCCCCCCCC >Mature Secondary Structure MHKIERLLQTLAPKGVEFKTLEEVFEIKNGYTPSKNNPEFWKNGTIPWFRMEDIRENGRI CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCC LKDSIQHITPKALKGKKLFPKNSIIISTKATIGEHALLIVDSLANQQFTFLSKKANCDLA HHHHHHHCCHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCEEEECCCCCCCEE LDMKFFFYQCFLLGEWCKNNINVSGFASVDMTAFKKYKFPIPPLEIQQEIVKILDAFTEL EHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH NTELNTELNTELKARKKQYEYYQNMLLDFNDINQSHKDAKERLAQKTYPKRLKTLLQTLA CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PKGVEFRKLGEVCEILDNRRIPIAKNKRNPGIYPYYGANGIQDYIDSYIFDGDFVLVGED CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHEECCCEEEECCC GSVINKDNTPVVNWASGKIWVNNHAHVLQTKNELKLKFLYFYLQTIDVSYCVAGTPPKIN CCEECCCCCCEEEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCC QENLKKIAIPIPPLEIQQEIVKILDQFSILTTDLLAGIPAEIKARKKQYEYYREKLLTFK HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEC PLTPLNSKELA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1691706 [H]