| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645397
GI number: 15645397
Start: 831112
End: 831795
Strand: Reverse
Name: Not Available
Synonym: HP0778
Alternate gene names: NA
Gene position: 831795-831112 (Counterclockwise)
Preceding gene: 15645402
Following gene: 15645396
Centisome position: 49.87
GC content: 36.84
Gene sequence:
>684_bases GTGCGTTTTGGTAAAATTGATTATTTGAACATGCTCCCTTTTGATGTGTTTATCAAATCCTACCCCACCCCTTGTTATTT CAAACAATTCTTACGGCTTAAAAAAACCTACCCCTCCAAACTCAATGAGAGTTTTTTATTCAGGCGTATTGATGCGGGGT TTATTTCTTCTATCGCCGGCTATCCATTCGCTCTTCATTCCCATTCTCTAGGCATTGTCGCTTATAAGGAAGTTTTAAGC GTGCTGGTTGTGGATACAAAAAACGCTTTTGATAAAGAAAGCGCTTCTTCAAACGCCCTCTCTCAAGCGCTAGGGTTAAA GGGCGAAGTGTTAATCGGCAATAAAGCACTGCAGTTTTATTATTCCAACCCTAAAAAAGATTTTATAGATTTAGCCGCTC TTTGGTATGAAAAAAAACGCTTGCCGTTTGTTTTTGGGCGTTTGTGTTATTACCAAAACAAGGATTTTTACAAGCGCTTG TCTTTAGCTTTCAAACATCAAAAAACAAAAATCCCTTACTACATCCTTAAAGAAGCCGCTTTAAAAACCAACTTAAAACG CCAAGATATTTTAAATTACTTGCAAAAAATTTACTACACTTTAGGCAAAAAGGAGCAATTAGGTCTTAAAGCGTTCTATC GTGAATTGTTATTCAAACGCATTCAAAAACCCAAGCGTTTTTAG
Upstream 100 bases:
>100_bases TAATGCCCTAATCGTTTGCCCCATGATAACAAAACTCTTTTTACTTTTAGTTAAGTTGTAAGAAACTTTAGCTACCATGC GATACAAAAAAGGATTTTAA
Downstream 100 bases:
>100_bases TGATTCGCTGAGAATGTAGGCTTAAAATTCAGAAAGGGTGTTTTTAAGCAAGATTAGGTTACAATCACAAGTTTTATTAA AATTTTATTAATTAATGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MRFGKIDYLNMLPFDVFIKSYPTPCYFKQFLRLKKTYPSKLNESFLFRRIDAGFISSIAGYPFALHSHSLGIVAYKEVLS VLVVDTKNAFDKESASSNALSQALGLKGEVLIGNKALQFYYSNPKKDFIDLAALWYEKKRLPFVFGRLCYYQNKDFYKRL SLAFKHQKTKIPYYILKEAALKTNLKRQDILNYLQKIYYTLGKKEQLGLKAFYRELLFKRIQKPKRF
Sequences:
>Translated_227_residues MRFGKIDYLNMLPFDVFIKSYPTPCYFKQFLRLKKTYPSKLNESFLFRRIDAGFISSIAGYPFALHSHSLGIVAYKEVLS VLVVDTKNAFDKESASSNALSQALGLKGEVLIGNKALQFYYSNPKKDFIDLAALWYEKKRLPFVFGRLCYYQNKDFYKRL SLAFKHQKTKIPYYILKEAALKTNLKRQDILNYLQKIYYTLGKKEQLGLKAFYRELLFKRIQKPKRF >Mature_227_residues MRFGKIDYLNMLPFDVFIKSYPTPCYFKQFLRLKKTYPSKLNESFLFRRIDAGFISSIAGYPFALHSHSLGIVAYKEVLS VLVVDTKNAFDKESASSNALSQALGLKGEVLIGNKALQFYYSNPKKDFIDLAALWYEKKRLPFVFGRLCYYQNKDFYKRL SLAFKHQKTKIPYYILKEAALKTNLKRQDILNYLQKIYYTLGKKEQLGLKAFYRELLFKRIQKPKRF
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26739; Mature: 26739
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFGKIDYLNMLPFDVFIKSYPTPCYFKQFLRLKKTYPSKLNESFLFRRIDAGFISSIAG CCCCCCCHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCC YPFALHSHSLGIVAYKEVLSVLVVDTKNAFDKESASSNALSQALGLKGEVLIGNKALQFY CCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEE YSNPKKDFIDLAALWYEKKRLPFVFGRLCYYQNKDFYKRLSLAFKHQKTKIPYYILKEAA ECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH LKTNLKRQDILNYLQKIYYTLGKKEQLGLKAFYRELLFKRIQKPKRF HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRFGKIDYLNMLPFDVFIKSYPTPCYFKQFLRLKKTYPSKLNESFLFRRIDAGFISSIAG CCCCCCCHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCC YPFALHSHSLGIVAYKEVLSVLVVDTKNAFDKESASSNALSQALGLKGEVLIGNKALQFY CCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEE YSNPKKDFIDLAALWYEKKRLPFVFGRLCYYQNKDFYKRLSLAFKHQKTKIPYYILKEAA ECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH LKTNLKRQDILNYLQKIYYTLGKKEQLGLKAFYRELLFKRIQKPKRF HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA