| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645344
GI number: 15645344
Start: 776481
End: 777473
Strand: Reverse
Name: Not Available
Synonym: HP0723
Alternate gene names: 15645344
Gene position: 777473-776481 (Counterclockwise)
Preceding gene: 15646201
Following gene: 15645340
Centisome position: 46.61
GC content: 45.72
Gene sequence:
>993_bases ATGGCTCAAAATTTACCCACCATTGCTTTACTGGCGACAGGGGGGACGATTGCAGGGAGTGGTGCGAGCGCGAGTTTGGG TAGTTATAAGAGTGGTGAGTTGGGCATCAAAGAGCTTTTGAAGGCTATCCCTAGTCTTAACAGACTCGCTCGCATTCAAG GGGAGCAGATTTCTAACATCGGCTCACAAGACATGAATGAAGAGGTATGGTTCAAGCTCGCCAAACGTGCCCAAGAATTG CTAGATGATAGCCGTATTCAAGGCGTGGTCATCACGCATGGCACGGACACTTTAGAAGAGAGCGCGTATTTTTTAAACTT AGTTTTACGCTCCACAAAACCGGTCGTGCTGGTGGGAGCGATGCGTAATGCTGCTTCTTTGAGCGCGGATGGGGCTTTGA ATTTATATAATGCTGTGAGCGTAGCGCTCAATGAAAAAAGTGCGAATAAAGGCGTGTTAGTGGTGATGGACGATAATATT TTTAGCGCTAGAGAAGTGATTAAAACGCACACCACCCACACTTCCACCTTTAAAGCCTTAAATAGCGGCGCGATAGGGAG CGTGTATTATGGCAAAACGCGCTATTACATGCAGCCTTTGAGAAAACACACCACAGAGAGCGAATTTTCCCTTTCACAAC TCAAAACCCCCCTGCCTAAAGTGGATATTATTTACACGCATGCTGGCATGACCCCTGATTTATTCCAAGCGAGCCTAAAC TCGCATGCAAAAGGCGTTGTGATAGCCGGGGTGGGTAATGGGAATGTGAGCGCTGGGTTTTTAAAAGCGATGCAAGAAGC GAGCCAAATGGGGGTGGTTATTGTTCGTTCTAGCAGGGTAAATAGCGGTGAGATTACTTCAGGCGAGATTGATGACAAGG CCTTCATCACAAGCGACAATTTAAACCCCCAAAAAGCTAGGGTGCTTTTACAACTCGCTTTAACTAAAACAAATAATAAA GAAAAAATCCAAGAAATGTTTGAAGAGTATTGA
Upstream 100 bases:
>100_bases GTTTTACTATACTATAAAATCTTTTAATTTCAAAAGGTGGTCCATAATGAGAATATTTTTGAAATTGTTGATTCTTTTAT TTTGTTTGAAGGGGCAGGTT
Downstream 100 bases:
>100_bases AAGATTCTCTTAAATCACCCAATTATCAAAGATAATTGGGTGATTTGGTTTATTTTGTTTTTGACTTTATTTTCATCAAA TATTGATAACTATCAAAATA
Product: L-asparaginase II
Products: NA
Alternate protein names: L-ASNase; L-asparagine amidohydrolase [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAQNLPTIALLATGGTIAGSGASASLGSYKSGELGIKELLKAIPSLNRLARIQGEQISNIGSQDMNEEVWFKLAKRAQEL LDDSRIQGVVITHGTDTLEESAYFLNLVLRSTKPVVLVGAMRNAASLSADGALNLYNAVSVALNEKSANKGVLVVMDDNI FSAREVIKTHTTHTSTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLN SHAKGVVIAGVGNGNVSAGFLKAMQEASQMGVVIVRSSRVNSGEITSGEIDDKAFITSDNLNPQKARVLLQLALTKTNNK EKIQEMFEEY
Sequences:
>Translated_330_residues MAQNLPTIALLATGGTIAGSGASASLGSYKSGELGIKELLKAIPSLNRLARIQGEQISNIGSQDMNEEVWFKLAKRAQEL LDDSRIQGVVITHGTDTLEESAYFLNLVLRSTKPVVLVGAMRNAASLSADGALNLYNAVSVALNEKSANKGVLVVMDDNI FSAREVIKTHTTHTSTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLN SHAKGVVIAGVGNGNVSAGFLKAMQEASQMGVVIVRSSRVNSGEITSGEIDDKAFITSDNLNPQKARVLLQLALTKTNNK EKIQEMFEEY >Mature_329_residues AQNLPTIALLATGGTIAGSGASASLGSYKSGELGIKELLKAIPSLNRLARIQGEQISNIGSQDMNEEVWFKLAKRAQELL DDSRIQGVVITHGTDTLEESAYFLNLVLRSTKPVVLVGAMRNAASLSADGALNLYNAVSVALNEKSANKGVLVVMDDNIF SAREVIKTHTTHTSTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLNS HAKGVVIAGVGNGNVSAGFLKAMQEASQMGVVIVRSSRVNSGEITSGEIDDKAFITSDNLNPQKARVLLQLALTKTNNKE KIQEMFEEY
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1789327, Length=329, Percent_Identity=49.2401215805471, Blast_Score=306, Evalue=1e-84, Organism=Escherichia coli, GI1788065, Length=288, Percent_Identity=28.125, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323189, Length=329, Percent_Identity=37.6899696048632, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6323187, Length=329, Percent_Identity=37.6899696048632, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6323186, Length=329, Percent_Identity=37.6899696048632, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6323184, Length=329, Percent_Identity=37.6899696048632, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6320527, Length=332, Percent_Identity=32.8313253012048, Blast_Score=183, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004550 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 35539; Mature: 35408
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQNLPTIALLATGGTIAGSGASASLGSYKSGELGIKELLKAIPSLNRLARIQGEQISNI CCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHCC GSQDMNEEVWFKLAKRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVLRSTKPVVLVGA CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE MRNAASLSADGALNLYNAVSVALNEKSANKGVLVVMDDNIFSAREVIKTHTTHTSTFKAL CCCCCCCCCCCCEEHHHHEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHH NSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLN CCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHC SHAKGVVIAGVGNGNVSAGFLKAMQEASQMGVVIVRSSRVNSGEITSGEIDDKAFITSDN CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEECCC LNPQKARVLLQLALTKTNNKEKIQEMFEEY CCHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure AQNLPTIALLATGGTIAGSGASASLGSYKSGELGIKELLKAIPSLNRLARIQGEQISNI CCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHCC GSQDMNEEVWFKLAKRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVLRSTKPVVLVGA CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE MRNAASLSADGALNLYNAVSVALNEKSANKGVLVVMDDNIFSAREVIKTHTTHTSTFKAL CCCCCCCCCCCCEEHHHHEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHH NSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLN CCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHC SHAKGVVIAGVGNGNVSAGFLKAMQEASQMGVVIVRSSRVNSGEITSGEIDDKAFITSDN CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEECCC LNPQKARVLLQLALTKTNNKEKIQEMFEEY CCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]