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Identifier: 15645238

GI number: 15645238

Start: 657634

End: 658335

Strand: Reverse

Name: Not Available

Synonym: HP0613

Alternate gene names: 15645238

Gene position: 658335-657634 (Counterclockwise)

Preceding gene: 15645239

Following gene: 15645237

Centisome position: 39.47

GC content: 32.91

Gene sequence:

>702_bases
ATGATTTCTAACATCAGCATACACCCAAAAACCATGTTTAAAAACGCTTTAAATATACAAGATTTTTCATTTAAAAGTCA
TACTAGTACAGCCATTATTGGCACAAATGGTGCTGGAAAATCAACGCTTATCAACACTATTCTAGGCATTAGATCAGACT
ATAATTTTAAAGCACAAAACAATAATATTCCATACCACGACAATGTTATACCACAACGCAAGCAATTGGGAGTTGTCTCT
AACCTATTCAACTACCCACCTAGATTAAACGCAAACGACCTTTTTAAATTCTATCAATTTTTTCACAAAAACTGCACTCC
AAATCTATTTGAAAAAAATCTTTTGAATAAAACCTACGAACACCTAAGTGATGGACAAAAACAGCGCTTAAAGATTGATT
TAGCTCTTAGCCACCACCCCCAATTAATTATTATGGATGAACCAGAAACTAGTTTAGAGCAAAACGCTCTTATAAGACTA
TCAAATCTCATAAGCTTGCGCAACACCCAACAACTTACAAGTATCATCGCCACTCATGATCTGATTGTCTTAGATAGTTG
CGAATGGGTATTGTTCCTTAAGAATGGCAACATTGCTCAATACAAACCTTTAAATTCTATATTAAAATCTGTAGCTAAAA
CTTTTAACTTTAAAGAAAAACCAACCACAAAAGACTTATTAGCATTACTAAAGGATATTTAG

Upstream 100 bases:

>100_bases
AAATATTAGTTAATTTTTTAGCAACGCTACGCTAATAAACCATCATTTGAATATAATAACCCTAAATAGGATTTTAAATC
ATTTCTAATAAGGGGATTTT

Downstream 100 bases:

>100_bases
TGGGAGCAATTCTATCTATCCTAAAACTTGAAATCAAATCTTATCTCACCAATACAAGCGCGCTATTTTGGACTTTTATT
TATCCTATTTTAATGCTCCT

Product: ABC transporter ATP-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MISNISIHPKTMFKNALNIQDFSFKSHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQNNNIPYHDNVIPQRKQLGVVS
NLFNYPPRLNANDLFKFYQFFHKNCTPNLFEKNLLNKTYEHLSDGQKQRLKIDLALSHHPQLIIMDEPETSLEQNALIRL
SNLISLRNTQQLTSIIATHDLIVLDSCEWVLFLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI

Sequences:

>Translated_233_residues
MISNISIHPKTMFKNALNIQDFSFKSHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQNNNIPYHDNVIPQRKQLGVVS
NLFNYPPRLNANDLFKFYQFFHKNCTPNLFEKNLLNKTYEHLSDGQKQRLKIDLALSHHPQLIIMDEPETSLEQNALIRL
SNLISLRNTQQLTSIIATHDLIVLDSCEWVLFLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI
>Mature_233_residues
MISNISIHPKTMFKNALNIQDFSFKSHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQNNNIPYHDNVIPQRKQLGVVS
NLFNYPPRLNANDLFKFYQFFHKNCTPNLFEKNLLNKTYEHLSDGQKQRLKIDLALSHHPQLIIMDEPETSLEQNALIRL
SNLISLRNTQQLTSIIATHDLIVLDSCEWVLFLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1788506, Length=237, Percent_Identity=27.8481012658228, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786703, Length=197, Percent_Identity=26.3959390862944, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48994883, Length=217, Percent_Identity=26.2672811059908, Blast_Score=64, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=201, Percent_Identity=27.363184079602, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17569081, Length=209, Percent_Identity=27.7511961722488, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26596; Mature: 26596

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNISIHPKTMFKNALNIQDFSFKSHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQN
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEECC
NNIPYHDNVIPQRKQLGVVSNLFNYPPRLNANDLFKFYQFFHKNCTPNLFEKNLLNKTYE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLSDGQKQRLKIDLALSHHPQLIIMDEPETSLEQNALIRLSNLISLRNTQQLTSIIATHD
HHCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LIVLDSCEWVLFLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI
EEEEECCCEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MISNISIHPKTMFKNALNIQDFSFKSHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQN
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEECC
NNIPYHDNVIPQRKQLGVVSNLFNYPPRLNANDLFKFYQFFHKNCTPNLFEKNLLNKTYE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLSDGQKQRLKIDLALSHHPQLIIMDEPETSLEQNALIRLSNLISLRNTQQLTSIIATHD
HHCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LIVLDSCEWVLFLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI
EEEEECCCEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]