| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645202
GI number: 15645202
Start: 607348
End: 608226
Strand: Reverse
Name: Not Available
Synonym: HP0577
Alternate gene names: 15645202
Gene position: 608226-607348 (Counterclockwise)
Preceding gene: 15645203
Following gene: 15645201
Centisome position: 36.47
GC content: 42.21
Gene sequence:
>879_bases ATGGGCATGCCAAATAGGGGCGTTGTTTTATTAGACGGGCAAGCGCTAGCTGATAATATAGAAAAAGATTTGAAACATAA AATCCAAATAATAACCGCACAAACGCATAAACGCCCCAAACTAGCCGTGATTTTAGTGGGGAAAGATCCCGCTAGTATCA CTTATGTCAATATGAAGATCAAAGCATGCGAAAGGGTGGGCATGGATTTTGACTTAAAAACCCTCCAAGAAAATATTACT GAAGCCAAATTGCTATCCTTGATTAAAGATTACAATACCGATCAAAACATTTCAGGCGTTTTAGTCCAGCTCCCTTTGCC CAGACACATTGATACTAAAATGATTTTAGAAGCCATTGACCCAAACAAAGATGTGGATGGTTTCCACCCCCTTAATATCG GTAAGCTCTGCACTCAAAAAGAATCGTTTCTGCCAGCCACCCCTATGGGCGTGATGCGGCTTTTAGAGCATTACCATATT GAAATCAAGGGTAAGGATGTGGCGATTATTGGAGCGAGCAATATCATTGGCAAACCTTTAAGCATGCTCATGCTAAACGC TGGGGCTAGCGTGAGCGTGTGCCATATTTTGACTAAAGACATTAGTTTTTACACCCAAAACGCTGATATTGTCTGCGTGG GCGTGGGTAAACCTGATTTGATTAAAGCGAGCATGTTAAAAAAAGGGGCTGTAGTGGTGGATATTGGGATCAATCATTTG AACGATGGGCGTATCGTGGGCGATGTGGATTTTAACAACGTGCAAAAAGTCGCCGGTTTTATCACCCCTGTGCCTAAAGG CGTGGGGCCTATGACGATTGTCTCGCTTTTAGAAAACACTCTAATCGCTTTTGAAAAACAACAAAGGAAGGGATTTTAA
Upstream 100 bases:
>100_bases TATCATGGGGCTAATCTTAAAGATTGACAAACTAGGTTTTTATTCCATTAAACGCATGATTTTTGCTACAATAATAGGAT TTTAATTATATAAAGGACAA
Downstream 100 bases:
>100_bases TGAAATTTTTACGCTCTGTTTATGCATTTTGCTCCAGTTGGGTAGGGACGATTGTTATTGTGCTGTTGGTTATCTTTTTT ATCGCGCAAGCCTTTATCAT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MGMPNRGVVLLDGQALADNIEKDLKHKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACERVGMDFDLKTLQENIT EAKLLSLIKDYNTDQNISGVLVQLPLPRHIDTKMILEAIDPNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHI EIKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTQNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHL NDGRIVGDVDFNNVQKVAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF
Sequences:
>Translated_292_residues MGMPNRGVVLLDGQALADNIEKDLKHKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACERVGMDFDLKTLQENIT EAKLLSLIKDYNTDQNISGVLVQLPLPRHIDTKMILEAIDPNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHI EIKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTQNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHL NDGRIVGDVDFNNVQKVAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF >Mature_291_residues GMPNRGVVLLDGQALADNIEKDLKHKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACERVGMDFDLKTLQENITE AKLLSLIKDYNTDQNISGVLVQLPLPRHIDTKMILEAIDPNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHIE IKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTQNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLN DGRIVGDVDFNNVQKVAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222418558, Length=293, Percent_Identity=41.6382252559727, Blast_Score=235, Evalue=3e-62, Organism=Homo sapiens, GI94721354, Length=296, Percent_Identity=42.9054054054054, Blast_Score=229, Evalue=2e-60, Organism=Homo sapiens, GI222136639, Length=283, Percent_Identity=36.0424028268551, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI36796743, Length=206, Percent_Identity=26.2135922330097, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1786741, Length=274, Percent_Identity=48.1751824817518, Blast_Score=273, Evalue=1e-74, Organism=Caenorhabditis elegans, GI17568735, Length=260, Percent_Identity=37.6923076923077, Blast_Score=170, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=43.5540069686411, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=38.9261744966443, Blast_Score=210, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322933, Length=280, Percent_Identity=23.2142857142857, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI17136816, Length=293, Percent_Identity=43.3447098976109, Blast_Score=250, Evalue=9e-67, Organism=Drosophila melanogaster, GI17136818, Length=293, Percent_Identity=43.3447098976109, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI62472483, Length=285, Percent_Identity=39.2982456140351, Blast_Score=204, Evalue=5e-53, Organism=Drosophila melanogaster, GI45551871, Length=285, Percent_Identity=39.2982456140351, Blast_Score=204, Evalue=5e-53, Organism=Drosophila melanogaster, GI24645718, Length=285, Percent_Identity=39.2982456140351, Blast_Score=204, Evalue=6e-53, Organism=Drosophila melanogaster, GI17137370, Length=285, Percent_Identity=39.2982456140351, Blast_Score=204, Evalue=6e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 31875; Mature: 31744
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMPNRGVVLLDGQALADNIEKDLKHKIQIITAQTHKRPKLAVILVGKDPASITYVNMKI CCCCCCCEEEECCHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEE KACERVGMDFDLKTLQENITEAKLLSLIKDYNTDQNISGVLVQLPLPRHIDTKMILEAID EEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCC PNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHIEIKGKDVAIIGASNIIGKPL CCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCCCH SMLMLNAGASVSVCHILTKDISFYTQNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHL HHHEECCCCCEEEHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCCC NDGRIVGDVDFNNVQKVAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF CCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GMPNRGVVLLDGQALADNIEKDLKHKIQIITAQTHKRPKLAVILVGKDPASITYVNMKI CCCCCCEEEECCHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEE KACERVGMDFDLKTLQENITEAKLLSLIKDYNTDQNISGVLVQLPLPRHIDTKMILEAID EEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCC PNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHIEIKGKDVAIIGASNIIGKPL CCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCCCH SMLMLNAGASVSVCHILTKDISFYTQNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHL HHHEECCCCCEEEHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCCC NDGRIVGDVDFNNVQKVAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF CCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA