| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645201
GI number: 15645201
Start: 606476
End: 607348
Strand: Reverse
Name: Not Available
Synonym: HP0576
Alternate gene names: 15645201
Gene position: 607348-606476 (Counterclockwise)
Preceding gene: 15645202
Following gene: 15645200
Centisome position: 36.41
GC content: 39.86
Gene sequence:
>873_bases ATGAAATTTTTACGCTCTGTTTATGCATTTTGCTCCAGTTGGGTAGGGACGATTGTTATTGTGCTGTTGGTTATCTTTTT TATCGCGCAAGCCTTTATCATTCCCTCTCGCTCTATGGTTGGCACGCTCTATGAGGGCGACATGCTCTTTGTCAAAAAGT TTTCTTACGGCATACCCATTCCTAAAATCCCATGGATTGAGCTTCCTGTTATGCCTGATTTTAAAAATAACGGACATTTG ATAGAGGGGGATCGCCCTAAGCGTGGCGAAGTGGTGGTGTTTATCCCTCCCCATGAAAAAAAGTCTTACTATGTTAAAAG GAATTTTGCCATTGGAGGCGATGAGGTGTTGTTCACTAATGAGGGTTTTTATTTGCACCCTTTTGAGAGCGACACGGACA AAAATTACATCGCTAAACATTACCCTAACGCCATGACAAAAGAATTTATGGGTAAAATTTTTGTTTTAAACCCTTATAAA AATGAGCATCCGGGTATCCATTACCAAAAAGACAATGAAACCTTCCACTTAATGGAGCAATTAGCCACTCAAGGCGCAGA AGCTAATATCAGCATGCAACTCATTCAAATGGAGGGCGAAAAGGTGTTTTATAAGAAAATCAATGACGATGAATTTTTCA TGATCGGCGACAACAGAGACAATTCTAGCGACTCGCGCTTTTGGGGGAGTGTGGCTTATAAAAACATCGTGGGTTCGCCA TGGTTTGTTTATTTCAGTTTGAGTTTAAAAAATAGCCTAGAAATGGATGCAGAAAATAACCCTAAAAAACGCTATCTGGT GCGTTGGGAACGCATGTTTAAAAGCGTTGGAGGCTTAGAAAAAATCATTAAAAAAGAAAACGCAACGCATTAA
Upstream 100 bases:
>100_bases TTATCACCCCTGTGCCTAAAGGCGTGGGGCCTATGACGATTGTCTCGCTTTTAGAAAACACTCTAATCGCTTTTGAAAAA CAACAAAGGAAGGGATTTTA
Downstream 100 bases:
>100_bases GGTTTTTTGTGCAATTTTTTGATTTCTCTTTAGAAAGTTTTATTACCACCTTAATGAAAATCCTAGCCCTTTTAATCGCT ATCATAGGGCATGAGATCAT
Product: signal peptidase I (lepB)
Products: NA
Alternate protein names: SPase I; Leader peptidase I [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKFLRSVYAFCSSWVGTIVIVLLVIFFIAQAFIIPSRSMVGTLYEGDMLFVKKFSYGIPIPKIPWIELPVMPDFKNNGHL IEGDRPKRGEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTNEGFYLHPFESDTDKNYIAKHYPNAMTKEFMGKIFVLNPYK NEHPGIHYQKDNETFHLMEQLATQGAEANISMQLIQMEGEKVFYKKINDDEFFMIGDNRDNSSDSRFWGSVAYKNIVGSP WFVYFSLSLKNSLEMDAENNPKKRYLVRWERMFKSVGGLEKIIKKENATH
Sequences:
>Translated_290_residues MKFLRSVYAFCSSWVGTIVIVLLVIFFIAQAFIIPSRSMVGTLYEGDMLFVKKFSYGIPIPKIPWIELPVMPDFKNNGHL IEGDRPKRGEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTNEGFYLHPFESDTDKNYIAKHYPNAMTKEFMGKIFVLNPYK NEHPGIHYQKDNETFHLMEQLATQGAEANISMQLIQMEGEKVFYKKINDDEFFMIGDNRDNSSDSRFWGSVAYKNIVGSP WFVYFSLSLKNSLEMDAENNPKKRYLVRWERMFKSVGGLEKIIKKENATH >Mature_290_residues MKFLRSVYAFCSSWVGTIVIVLLVIFFIAQAFIIPSRSMVGTLYEGDMLFVKKFSYGIPIPKIPWIELPVMPDFKNNGHL IEGDRPKRGEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTNEGFYLHPFESDTDKNYIAKHYPNAMTKEFMGKIFVLNPYK NEHPGIHYQKDNETFHLMEQLATQGAEANISMQLIQMEGEKVFYKKINDDEFFMIGDNRDNSSDSRFWGSVAYKNIVGSP WFVYFSLSLKNSLEMDAENNPKKRYLVRWERMFKSVGGLEKIIKKENATH
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S26 family [H]
Homologues:
Organism=Escherichia coli, GI1788921, Length=247, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000223 - InterPro: IPR019758 - InterPro: IPR019759 - InterPro: IPR015927 - InterPro: IPR011056 [H]
Pfam domain/function: PF00717 Peptidase_S24 [H]
EC number: =3.4.21.89 [H]
Molecular weight: Translated: 33710; Mature: 33710
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLRSVYAFCSSWVGTIVIVLLVIFFIAQAFIIPSRSMVGTLYEGDMLFVKKFSYGIPI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCEEEEEEECCCCCC PKIPWIELPVMPDFKNNGHLIEGDRPKRGEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTN CCCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEC EGFYLHPFESDTDKNYIAKHYPNAMTKEFMGKIFVLNPYKNEHPGIHYQKDNETFHLMEQ CCEEEECCCCCCCCCHHHHHCCCHHHHHHCCEEEEECCCCCCCCCEEEECCCCHHHHHHH LATQGAEANISMQLIQMEGEKVFYKKINDDEFFMIGDNRDNSSDSRFWGSVAYKNIVGSP HHHCCCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCC WFVYFSLSLKNSLEMDAENNPKKRYLVRWERMFKSVGGLEKIIKKENATH EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCC >Mature Secondary Structure MKFLRSVYAFCSSWVGTIVIVLLVIFFIAQAFIIPSRSMVGTLYEGDMLFVKKFSYGIPI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCEEEEEEECCCCCC PKIPWIELPVMPDFKNNGHLIEGDRPKRGEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTN CCCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEC EGFYLHPFESDTDKNYIAKHYPNAMTKEFMGKIFVLNPYKNEHPGIHYQKDNETFHLMEQ CCEEEECCCCCCCCCHHHHHCCCHHHHHHCCEEEEECCCCCCCCCEEEECCCCHHHHHHH LATQGAEANISMQLIQMEGEKVFYKKINDDEFFMIGDNRDNSSDSRFWGSVAYKNIVGSP HHHCCCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCC WFVYFSLSLKNSLEMDAENNPKKRYLVRWERMFKSVGGLEKIIKKENATH EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]