| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645139
GI number: 15645139
Start: 538237
End: 539682
Strand: Reverse
Name: Not Available
Synonym: HP0512
Alternate gene names: 15645139
Gene position: 539682-538237 (Counterclockwise)
Preceding gene: 15645146
Following gene: 15645123
Centisome position: 32.36
GC content: 42.19
Gene sequence:
>1446_bases ATGATAGTAAGAACTCAAAATAGTGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGCTTA AAGAGGGGATTCCTTTTGATGCGAGTTGTTTTAAAGGCTGGCAAGGCATTGAACACTCCGATATGATTTTAACCCCCGAC TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGTGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAGAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAACATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTTATCTTTGATTCCATTAAAATTAAAGACGCTTCCAATTCCCAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAGAAGCTTTGAAAACGGCGTCAATTTTGGGCATAGACCGGGCAAACA AGGGGGTTATATGCCTGTGCCGCCAACGGATACGATGATGGATATTCGCACAGAAATTGTGAAAGTCTTAAACCAAGTGG GGCTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCGGCTGATAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGGAAAACCGCCACTTTCATGCC AAAACCTTTATACGGGGATAACGGGAGCGGGATGCACACCCATGTGAGCGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGCGAGTTTGCCTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGATTGGCCGCT TTCACTAACGCTTCCACTAATTCTTACAAACGCCTAATTCCGGGATATGAAGCCCCATCCATTTTAACTTATTCGGCTAA TAACAGGAGCGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAATAGTGCTAGGTTTGAATTCAGATTCCCGGACAGCT CATCAAACCCCTACTTGGCTTTTGCAGCGATTTTAATGGCAGGCATGGATGGCGTTAAAAATAAGATTGATCCCGGCGAG GCGATGGATATTAACCTTTTCAAATTGACTTTAGATGAAATTAGGGAAAAAGGTATCAAACAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAAAGTCAGGTCTTTAGCGAAGAATTTATTCAAGCCT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAGCCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA
Upstream 100 bases:
>100_bases ATCTTAATAAAACTTGATACAGATTCTACTTTTTTTGCCCCATAAATGCTATAATCACCCCTATCAATCAAACTCAATTC ATAACAATTAAAGGTGGTTA
Downstream 100 bases:
>100_bases AACAATGAGTGGGTTAATAATCCCACTCTAAAATTTTAGAATAAGGAAAAAATACCTTGTTCTTAAAAAAAGTGGTTGGA AAAATTGATTTTCTTTGCTT
Product: glutamine synthetase (glnA)
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MIVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMLKEGIPFDASCFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C
Sequences:
>Translated_481_residues MIVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMLKEGIPFDASCFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C >Mature_481_residues MIVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMLKEGIPFDASCFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=462, Percent_Identity=49.1341991341991, Blast_Score=455, Evalue=1e-129, Organism=Escherichia coli, GI87081870, Length=476, Percent_Identity=24.3697478991597, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI24641290, Length=332, Percent_Identity=25.3012048192771, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24641292, Length=332, Percent_Identity=25.3012048192771, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281360453, Length=324, Percent_Identity=26.5432098765432, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI17136208, Length=324, Percent_Identity=26.5432098765432, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24580558, Length=324, Percent_Identity=26.5432098765432, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 54514; Mature: 54514
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMLKEGIPFD CEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC ASCFKGWQGIEHSDMILTPDLVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKK HHHHHCCCCCCCCCEEECHHHHHHHHCCCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHH ALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYEVDSEEGEWNRDRSFENGVNF HHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHCCCC GHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHH AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGL HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHCCH SEFALHFLGGVLRHARGLAAFTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGIS HHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEECCCCC KNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGEAMDINLFKLTLDEIREKGIK CCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHH QMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECC C C >Mature Secondary Structure MIVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMLKEGIPFD CEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC ASCFKGWQGIEHSDMILTPDLVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKK HHHHHCCCCCCCCCEEECHHHHHHHHCCCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHH ALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYEVDSEEGEWNRDRSFENGVNF HHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHCCCC GHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHH AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGL HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHCCH SEFALHFLGGVLRHARGLAAFTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGIS HHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEECCCCC KNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGEAMDINLFKLTLDEIREKGIK CCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHH QMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECC C C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]