| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645091
GI number: 15645091
Start: 481319
End: 482782
Strand: Reverse
Name: Not Available
Synonym: HP0463
Alternate gene names: 15645091
Gene position: 482782-481319 (Counterclockwise)
Preceding gene: 15645092
Following gene: 15645090
Centisome position: 28.95
GC content: 37.23
Gene sequence:
>1464_bases ATGCCTAATAACGCTTTATTGCAAATCAAACAAGACACCCTAAGCCTCATTGACGATTTAAAAGTCATTTGCACGAGTTT TGGTTTAGGGAACGATGGCAACGAATACAAAATCATCACGCAATGCTTTTTGTATAAATTCTTATGCGATAAGTTTGAAT TCCTTTTTGAACAAGAATTCCCCAACCAAACGATACAAGATTACAAAGACTTTAACAAGGAAGAAAAAGAAGAGTTCTTT ATTACCTTAACCGATAAAAGACTCCCCAAACTCGCCTATGATGATCTTTTAAACTATCTTTTTGAAAAACATTTTAACGA TAACGATTTACACCTAAAGCTAGATATTATTTTTAATCGTATTTCTAGCAATAATGCCGAGCTTTTCAATACCACAAGCA CGGACAAAACCACTATCGCTTTATTTGAAAGCATCTCACAATACATTAATGAAGAGTCTAAAAGGGCTAATTTTACAAGA GTTTTACTGGACAAACTCAAAAAGTTTAATTTCAAACAAGCTTTTTTAAACTTACAAAACCAACAAGGCTATGATTTTTT CGCCCCCATTTTTGAATACTTACTCAAAGATTACAATAACGCCGGCGGAGGCAAATACGCCGAATACTACACCCCTTTAA GCATCGCTAGCATCATTGCTAAGCTTTTGATTAATGAGCCGACTAGAAATGTCAAAATCTATGACCCAAGTGCAGGCACA GGAACGCTTTTAATGGCATTAGCCCACCAAATAGGCACGGATTCTTGCACCCTTTATGCCCAAGACATTTCGCAAAAATC CTTAAGAATGCTCAAACTCAACTTGATTTTAAACGACTTGACCCACTCTTTAAGAAACGCCATTGAGGGAAACACTTTAA CCAACCCCTACCATTCTAAAGACTTTAAGGGGAAAATGGATTACATCGTGAGTAACCCCCCTTTCAAGCTGGATTTTTCC AACGAGCATGCCGAAATTTCGCAAAACAAAAACGATTTTTTCTTAGGCGTGCCTAATATCCCTAAAAACAATAAAAGCAA AATGCCCATTTACACGCTCTTTTTCCAGCATTGCTTGAACATGCTTAGTAATAAGGGTAAGGGGGCTATTATCGTGCCAA CCGGATTCATCAGCGCTAAAAGCGGGGTAGAAAATAAGATTATCCGGCATTTAGTGGATGAAAGGCTCGTTTATGGGGTG GTTTGCATGCCCAGTCAGGTTTTTGCCAACACCGGCACTAACGTGAGCATCATCTTTTTTCAAAAAACGCCAAGCGCAAA GGAAGTGGTTTTGATTGACGCTTCCAAACTCGGCGAAGAATACACCGAAAACAAAAACAAAAAAACGCGCTTAAGACCAA GCGATATTGATTTGATTTTAGAAACTTTTCAAAATAAAACTAAAAAATCGGATTTTTGCGCTCTGGTTTCTTTTGATGAA ATTACAGAAAAAATTATTCTCTAA
Upstream 100 bases:
>100_bases AAAAAAGACCCCTCCTTAAAAGATTTAGAAAAAGAAAAAGAACTTATCATTCAAACCCTTTTTAACGAACTCACACAAAA CCACCATCAAGGAAATCCGC
Downstream 100 bases:
>100_bases ACCCTGGGCAGTATTTCATTATAGAAGACACGAGCGAGAAAATCAGCCAAGCGGAGTTTGAAAATTTAATGCAACAATAT TCAAGCGAACTGACAAGCCT
Product: type I restriction enzyme M protein (hsdM)
Products: NA
Alternate protein names: M.MpnORFDP [H]
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MPNNALLQIKQDTLSLIDDLKVICTSFGLGNDGNEYKIITQCFLYKFLCDKFEFLFEQEFPNQTIQDYKDFNKEEKEEFF ITLTDKRLPKLAYDDLLNYLFEKHFNDNDLHLKLDIIFNRISSNNAELFNTTSTDKTTIALFESISQYINEESKRANFTR VLLDKLKKFNFKQAFLNLQNQQGYDFFAPIFEYLLKDYNNAGGGKYAEYYTPLSIASIIAKLLINEPTRNVKIYDPSAGT GTLLMALAHQIGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSLRNAIEGNTLTNPYHSKDFKGKMDYIVSNPPFKLDFS NEHAEISQNKNDFFLGVPNIPKNNKSKMPIYTLFFQHCLNMLSNKGKGAIIVPTGFISAKSGVENKIIRHLVDERLVYGV VCMPSQVFANTGTNVSIIFFQKTPSAKEVVLIDASKLGEEYTENKNKKTRLRPSDIDLILETFQNKTKKSDFCALVSFDE ITEKIIL
Sequences:
>Translated_487_residues MPNNALLQIKQDTLSLIDDLKVICTSFGLGNDGNEYKIITQCFLYKFLCDKFEFLFEQEFPNQTIQDYKDFNKEEKEEFF ITLTDKRLPKLAYDDLLNYLFEKHFNDNDLHLKLDIIFNRISSNNAELFNTTSTDKTTIALFESISQYINEESKRANFTR VLLDKLKKFNFKQAFLNLQNQQGYDFFAPIFEYLLKDYNNAGGGKYAEYYTPLSIASIIAKLLINEPTRNVKIYDPSAGT GTLLMALAHQIGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSLRNAIEGNTLTNPYHSKDFKGKMDYIVSNPPFKLDFS NEHAEISQNKNDFFLGVPNIPKNNKSKMPIYTLFFQHCLNMLSNKGKGAIIVPTGFISAKSGVENKIIRHLVDERLVYGV VCMPSQVFANTGTNVSIIFFQKTPSAKEVVLIDASKLGEEYTENKNKKTRLRPSDIDLILETFQNKTKKSDFCALVSFDE ITEKIIL >Mature_486_residues PNNALLQIKQDTLSLIDDLKVICTSFGLGNDGNEYKIITQCFLYKFLCDKFEFLFEQEFPNQTIQDYKDFNKEEKEEFFI TLTDKRLPKLAYDDLLNYLFEKHFNDNDLHLKLDIIFNRISSNNAELFNTTSTDKTTIALFESISQYINEESKRANFTRV LLDKLKKFNFKQAFLNLQNQQGYDFFAPIFEYLLKDYNNAGGGKYAEYYTPLSIASIIAKLLINEPTRNVKIYDPSAGTG TLLMALAHQIGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSLRNAIEGNTLTNPYHSKDFKGKMDYIVSNPPFKLDFSN EHAEISQNKNDFFLGVPNIPKNNKSKMPIYTLFFQHCLNMLSNKGKGAIIVPTGFISAKSGVENKIIRHLVDERLVYGVV CMPSQVFANTGTNVSIIFFQKTPSAKEVVLIDASKLGEEYTENKNKKTRLRPSDIDLILETFQNKTKKSDFCALVSFDEI TEKIIL
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR004546 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 55801; Mature: 55670
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNNALLQIKQDTLSLIDDLKVICTSFGLGNDGNEYKIITQCFLYKFLCDKFEFLFEQEF CCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PNQTIQDYKDFNKEEKEEFFITLTDKRLPKLAYDDLLNYLFEKHFNDNDLHLKLDIIFNR CCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEH ISSNNAELFNTTSTDKTTIALFESISQYINEESKRANFTRVLLDKLKKFNFKQAFLNLQN HCCCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC QQGYDFFAPIFEYLLKDYNNAGGGKYAEYYTPLSIASIIAKLLINEPTRNVKIYDPSAGT CCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCH GTLLMALAHQIGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSLRNAIEGNTLTNPYHSK HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DFKGKMDYIVSNPPFKLDFSNEHAEISQNKNDFFLGVPNIPKNNKSKMPIYTLFFQHCLN CCCCCCCEEECCCCEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH MLSNKGKGAIIVPTGFISAKSGVENKIIRHLVDERLVYGVVCMPSQVFANTGTNVSIIFF HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCEEEEEE QKTPSAKEVVLIDASKLGEEYTENKNKKTRLRPSDIDLILETFQNKTKKSDFCALVSFDE ECCCCCCEEEEEEHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHH ITEKIIL HHHHHCC >Mature Secondary Structure PNNALLQIKQDTLSLIDDLKVICTSFGLGNDGNEYKIITQCFLYKFLCDKFEFLFEQEF CCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PNQTIQDYKDFNKEEKEEFFITLTDKRLPKLAYDDLLNYLFEKHFNDNDLHLKLDIIFNR CCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEH ISSNNAELFNTTSTDKTTIALFESISQYINEESKRANFTRVLLDKLKKFNFKQAFLNLQN HCCCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC QQGYDFFAPIFEYLLKDYNNAGGGKYAEYYTPLSIASIIAKLLINEPTRNVKIYDPSAGT CCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCH GTLLMALAHQIGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSLRNAIEGNTLTNPYHSK HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DFKGKMDYIVSNPPFKLDFSNEHAEISQNKNDFFLGVPNIPKNNKSKMPIYTLFFQHCLN CCCCCCCEEECCCCEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH MLSNKGKGAIIVPTGFISAKSGVENKIIRHLVDERLVYGVVCMPSQVFANTGTNVSIIFF HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCEEEEEE QKTPSAKEVVLIDASKLGEEYTENKNKKTRLRPSDIDLILETFQNKTKKSDFCALVSFDE ECCCCCCEEEEEEHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHH ITEKIIL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]