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Identifier: 15644857

GI number: 15644857

Start: 238708

End: 240159

Strand: Reverse

Name: Not Available

Synonym: HP0229

Alternate gene names: NA

Gene position: 240159-238708 (Counterclockwise)

Preceding gene: 15644858

Following gene: 15644855

Centisome position: 14.4

GC content: 41.18

Gene sequence:

>1452_bases
ATGAAAAAAACGATTTTACTTTCTCTTATGGTTTCATCGCTCCTCGCTGAAAATGACGGCGTTTTTATGAGCGTGGGCTA
TCAAATCGGCGAAGCGGTTCAACAAGTGAAAAACACCGGCGAAATCCAAAAAGTCTCCAACGCTTACGAAAATTTGAACA
ATCTTTTAACCCGCTATAACGAACTCAAACAAACGGCCTCTAACACCAATTCAAGTACCGCTCAAGCGATTGATAATCTA
AAAGAGAGCGCTAGCCGATTGAAAACGACCCCCAATAGCGCTAATCAAGCCGTGTCTTCAGCGCTCAGCTCTGCGGTAGC
CATGTGGCAAGTAATAGTCTCTAATTTAGCCAATAACTCGCTACCCACTAGTGAATACAACAAAATCAATGCGATTTCTC
AATCGCTCCAAAACACCCTAGAAAATAAAAACAATGATCTTAAAATTGAAAATGACTACGACCATCTTTTAACTCAAGCT
AGCACCATTATTAATACCCTTCAAAGCCAATGCCCAGGCATAGACGGAGGCAATGGCAAACCATGGGGCATTAATGCAAG
CGGGAACGCATGCAATATTTTTGGCAACACCTTTAACGCCATCACTAGCATGATAGATAGCGCTAAAAAAGCCGCCGCAG
ATGCCCGAAGAACTGCCCCAGAAAGTCCAAACCAACCAAGTGCGTTTAACAACGCTGATTTCAATAAAAACCTTAATCAA
GTCTCAAGCGTTATTAATGACACGATCTCTTACCTCAAAGGGGACAATTTAGCAACCATCTACAACACCCTTCAAAAAAC
GCCCGATTCTAAAGGGTTTCAAAGTTTGGTGAGCCGATCTAGCTATAGTTATTCCCTCAACGAAACCCAATATTCTGAAT
TCCAAACTACCACCAAAGAGTTTGGCCATAACCCTTTTAGAAGCGTGGGTTTAATCAACTCTCAAAGCAATAACGGAGCG
ATGAATGGCGTGGGCGTGCAATTAGGCTATAAGCAATTCTTTGGGAAAAATAAATTTTTTGGGATCCGTTATTATGCCTT
TTTTGATTACAACCATGCCTATATCAAATCCAACTTTTTCAACTCCGCTTCCAATGTTTTCACTTATGGCGCAGGCAGTG
ATCTTTTATTGAATTTCATCAATGGCGGATCCGATAAAAACCGCAAAGTCTCTTTTGGCATTTTTGGAGGCATCGCTCTA
GCAGGCACGACATGGCTTAATTCCCAATTTATGAATTTAAAAACCACCAATAGCGCCTACAGCGCTAAGATCAACAACAC
CAATTTCCAATTCTTATTCAATACTGGTTTAAGGCTTCAAGGGATTCACCATGGCGTTGAATTAGGCGTGAAAATCCCCA
CCATCAACACGAATTACTATTCTTTCATGGGCGCTAAATTAGCATACCGAAGACTTTATAGCGTGTATTTCAATTATGTT
TTGGCCTATTGA

Upstream 100 bases:

>100_bases
TAAAAATTCAATAAATTTATGGCACAATTTAAACTTATTGTAAATAAAGTTTCAATTTGATACGATTTTACAAACAAAAC
ATTACTTTAAGGAACATTTT

Downstream 100 bases:

>100_bases
TATTGAATCGGTTCTCATTACTAATGAGGACAAAGCCAAACTTTTTGGCTCTCAATGAATAACGGCATCATTTTACTTGA
CTTTTTACAAAAAACACACT

Product: outer membrane protein (omp6)

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein HorE; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein SabB/HopO; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MKKTILLSLMVSSLLAENDGVFMSVGYQIGEAVQQVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNTNSSTAQAIDNL
KESASRLKTTPNSANQAVSSALSSAVAMWQVIVSNLANNSLPTSEYNKINAISQSLQNTLENKNNDLKIENDYDHLLTQA
STIINTLQSQCPGIDGGNGKPWGINASGNACNIFGNTFNAITSMIDSAKKAAADARRTAPESPNQPSAFNNADFNKNLNQ
VSSVINDTISYLKGDNLATIYNTLQKTPDSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVGLINSQSNNGA
MNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYGAGSDLLLNFINGGSDKNRKVSFGIFGGIAL
AGTTWLNSQFMNLKTTNSAYSAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYV
LAY

Sequences:

>Translated_483_residues
MKKTILLSLMVSSLLAENDGVFMSVGYQIGEAVQQVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNTNSSTAQAIDNL
KESASRLKTTPNSANQAVSSALSSAVAMWQVIVSNLANNSLPTSEYNKINAISQSLQNTLENKNNDLKIENDYDHLLTQA
STIINTLQSQCPGIDGGNGKPWGINASGNACNIFGNTFNAITSMIDSAKKAAADARRTAPESPNQPSAFNNADFNKNLNQ
VSSVINDTISYLKGDNLATIYNTLQKTPDSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVGLINSQSNNGA
MNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYGAGSDLLLNFINGGSDKNRKVSFGIFGGIAL
AGTTWLNSQFMNLKTTNSAYSAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYV
LAY
>Mature_483_residues
MKKTILLSLMVSSLLAENDGVFMSVGYQIGEAVQQVKNTGEIQKVSNAYENLNNLLTRYNELKQTASNTNSSTAQAIDNL
KESASRLKTTPNSANQAVSSALSSAVAMWQVIVSNLANNSLPTSEYNKINAISQSLQNTLENKNNDLKIENDYDHLLTQA
STIINTLQSQCPGIDGGNGKPWGINASGNACNIFGNTFNAITSMIDSAKKAAADARRTAPESPNQPSAFNNADFNKNLNQ
VSSVINDTISYLKGDNLATIYNTLQKTPDSKGFQSLVSRSSYSYSLNETQYSEFQTTTKEFGHNPFRSVGLINSQSNNGA
MNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYIKSNFFNSASNVFTYGAGSDLLLNFINGGSDKNRKVSFGIFGGIAL
AGTTWLNSQFMNLKTTNSAYSAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYV
LAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53064; Mature: 53064

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTILLSLMVSSLLAENDGVFMSVGYQIGEAVQQVKNTGEIQKVSNAYENLNNLLTRYN
CCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ELKQTASNTNSSTAQAIDNLKESASRLKTTPNSANQAVSSALSSAVAMWQVIVSNLANNS
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPTSEYNKINAISQSLQNTLENKNNDLKIENDYDHLLTQASTIINTLQSQCPGIDGGNGK
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PWGINASGNACNIFGNTFNAITSMIDSAKKAAADARRTAPESPNQPSAFNNADFNKNLNQ
CCEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
VSSVINDTISYLKGDNLATIYNTLQKTPDSKGFQSLVSRSSYSYSLNETQYSEFQTTTKE
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHH
FGHNPFRSVGLINSQSNNGAMNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYIKSNFF
HCCCCHHHCCCEECCCCCCCCCCEEEEECHHHHCCCCCEEEEEEEEEEECCCCEEEHHHH
NSASNVFTYGAGSDLLLNFINGGSDKNRKVSFGIFGGIALAGTTWLNSQFMNLKTTNSAY
CCCCCEEEECCCHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHCCHHEEEEECCCCE
SAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYV
EEEECCCCEEEEEECCCEEEEECCCEEECEEECEECCCHHHHHHHHHHHHHHHHHHHHHH
LAY
HCC
>Mature Secondary Structure
MKKTILLSLMVSSLLAENDGVFMSVGYQIGEAVQQVKNTGEIQKVSNAYENLNNLLTRYN
CCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ELKQTASNTNSSTAQAIDNLKESASRLKTTPNSANQAVSSALSSAVAMWQVIVSNLANNS
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPTSEYNKINAISQSLQNTLENKNNDLKIENDYDHLLTQASTIINTLQSQCPGIDGGNGK
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PWGINASGNACNIFGNTFNAITSMIDSAKKAAADARRTAPESPNQPSAFNNADFNKNLNQ
CCEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
VSSVINDTISYLKGDNLATIYNTLQKTPDSKGFQSLVSRSSYSYSLNETQYSEFQTTTKE
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHH
FGHNPFRSVGLINSQSNNGAMNGVGVQLGYKQFFGKNKFFGIRYYAFFDYNHAYIKSNFF
HCCCCHHHCCCEECCCCCCCCCCEEEEECHHHHCCCCCEEEEEEEEEEECCCCEEEHHHH
NSASNVFTYGAGSDLLLNFINGGSDKNRKVSFGIFGGIALAGTTWLNSQFMNLKTTNSAY
CCCCCEEEECCCHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHCCHHEEEEECCCCE
SAKINNTNFQFLFNTGLRLQGIHHGVELGVKIPTINTNYYSFMGAKLAYRRLYSVYFNYV
EEEECCCCEEEEEECCCEEEEECCCEEECEEECEECCCHHHHHHHHHHHHHHHHHHHHHH
LAY
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA