| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644839
GI number: 15644839
Start: 218266
End: 219018
Strand: Reverse
Name: Not Available
Synonym: HP0211
Alternate gene names: 15644839
Gene position: 219018-218266 (Counterclockwise)
Preceding gene: 15644840
Following gene: 15644835
Centisome position: 13.13
GC content: 38.78
Gene sequence:
>753_bases ATGCTAGGAAACGTTAAAAAAACCCTTTTTGGGGTCTTGTGTTTGGGCACGTTGTGTTTGAGAGGGTTAATGGCAGAGCC AGACGCTAAAGAGCTTGTTAATTTAGGCATAGAGAGCGCGAAGAAGCAAGATTTCGCTCAAGCTAAAACGCATTTTGAAA AAGCTTGTGAGTTAAAAAATGGCTTTGGATGTGTTTTTTTAGGGGCGTTCTATGAAGAAGGGAAAGGAGTGGGAAAAGAC TTGAAAAAAGCCATCCAATTTTACACTAAAGGTTGTGAATTAAATGATGGTTATGGGTGTAACCTGCTAGGAAATTTATA CTATAACGGACAAGGCGTGTCAAAAGACGCTAAAAAAGCCTCACAATACTACTCTAAAGCTTGCGACTTAAACCATGCTG AAGGGTGTATGGTATTAGGAAGCTTACACCATTATGGCGTAGGCACGCCTAAGGATTTAAGAAAGGCTCTTGATTTGTAT GAAAAAGCTTGCGATTTAAAAGACAGCCCAGGGTGTATTAATGCAGGATATATATATAGTGTAACAAAGAATTTTAAGGA GGCTATCGTTCGTTATTCTAAAGCATGCGAATTAAAAGATGGTAGGGGGTGTTATAATTTAGGGGTTATGCAATACAACG CTCAAGGTACAGCAAAGGACGAAAAGCAAGCGGTAGAAAACTTTAAAAAAGGCTGCAAATCAAGCGTTAAAGAAGCATGC GACGCTCTCAAGGAATTAAAAATAGAACTTTAA
Upstream 100 bases:
>100_bases GAGGGCTTGAGTGAGGCATAAAATAAACAAACATTAAGTAAGGCTTATCAATATTTGATTACAATTATAAGGGTTACATT TTTTTAATAGGAGATATACC
Downstream 100 bases:
>100_bases TTTCAATGAAGTTAGCTAAACGCTGCGTTTAGCTGGCTTTTACGCTTTTTATATTTTAAGGAAAACATAAACCCTACGAA CCAATCTTTTTAATTATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine-rich 28 kDa protein [H]
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKD LKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY EKACDLKDSPGCINAGYIYSVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC DALKELKIEL
Sequences:
>Translated_250_residues MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKD LKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY EKACDLKDSPGCINAGYIYSVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC DALKELKIEL >Mature_250_residues MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKD LKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY EKACDLKDSPGCINAGYIYSVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC DALKELKIEL
Specific function: Slowly hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives. May be involved in the synthesis of the cell wall peptidoglycan [H]
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
Organism=Escherichia coli, GI87081769, Length=241, Percent_Identity=23.2365145228216, Blast_Score=80, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355295, Length=165, Percent_Identity=30.3030303030303, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007256, Length=215, Percent_Identity=29.7674418604651, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006597 - InterPro: IPR011990 [H]
Pfam domain/function: PF08238 Sel1 [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 27366; Mature: 27366
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKN CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKA CCCCEEHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECEEECCCCCCHHHHHH SQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIYS HHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC HHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH DALKELKIEL HHHHHHHCCC >Mature Secondary Structure MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKN CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKA CCCCEEHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECEEECCCCCCHHHHHH SQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIYS HHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC HHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH DALKELKIEL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]