Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15644839

GI number: 15644839

Start: 218266

End: 219018

Strand: Reverse

Name: Not Available

Synonym: HP0211

Alternate gene names: 15644839

Gene position: 219018-218266 (Counterclockwise)

Preceding gene: 15644840

Following gene: 15644835

Centisome position: 13.13

GC content: 38.78

Gene sequence:

>753_bases
ATGCTAGGAAACGTTAAAAAAACCCTTTTTGGGGTCTTGTGTTTGGGCACGTTGTGTTTGAGAGGGTTAATGGCAGAGCC
AGACGCTAAAGAGCTTGTTAATTTAGGCATAGAGAGCGCGAAGAAGCAAGATTTCGCTCAAGCTAAAACGCATTTTGAAA
AAGCTTGTGAGTTAAAAAATGGCTTTGGATGTGTTTTTTTAGGGGCGTTCTATGAAGAAGGGAAAGGAGTGGGAAAAGAC
TTGAAAAAAGCCATCCAATTTTACACTAAAGGTTGTGAATTAAATGATGGTTATGGGTGTAACCTGCTAGGAAATTTATA
CTATAACGGACAAGGCGTGTCAAAAGACGCTAAAAAAGCCTCACAATACTACTCTAAAGCTTGCGACTTAAACCATGCTG
AAGGGTGTATGGTATTAGGAAGCTTACACCATTATGGCGTAGGCACGCCTAAGGATTTAAGAAAGGCTCTTGATTTGTAT
GAAAAAGCTTGCGATTTAAAAGACAGCCCAGGGTGTATTAATGCAGGATATATATATAGTGTAACAAAGAATTTTAAGGA
GGCTATCGTTCGTTATTCTAAAGCATGCGAATTAAAAGATGGTAGGGGGTGTTATAATTTAGGGGTTATGCAATACAACG
CTCAAGGTACAGCAAAGGACGAAAAGCAAGCGGTAGAAAACTTTAAAAAAGGCTGCAAATCAAGCGTTAAAGAAGCATGC
GACGCTCTCAAGGAATTAAAAATAGAACTTTAA

Upstream 100 bases:

>100_bases
GAGGGCTTGAGTGAGGCATAAAATAAACAAACATTAAGTAAGGCTTATCAATATTTGATTACAATTATAAGGGTTACATT
TTTTTAATAGGAGATATACC

Downstream 100 bases:

>100_bases
TTTCAATGAAGTTAGCTAAACGCTGCGTTTAGCTGGCTTTTACGCTTTTTATATTTTAAGGAAAACATAAACCCTACGAA
CCAATCTTTTTAATTATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cysteine-rich 28 kDa protein [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKD
LKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY
EKACDLKDSPGCINAGYIYSVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC
DALKELKIEL

Sequences:

>Translated_250_residues
MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKD
LKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY
EKACDLKDSPGCINAGYIYSVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC
DALKELKIEL
>Mature_250_residues
MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKD
LKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY
EKACDLKDSPGCINAGYIYSVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC
DALKELKIEL

Specific function: Slowly hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives. May be involved in the synthesis of the cell wall peptidoglycan [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=241, Percent_Identity=23.2365145228216, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355295, Length=165, Percent_Identity=30.3030303030303, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116007256, Length=215, Percent_Identity=29.7674418604651, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: =3.5.2.6 [H]

Molecular weight: Translated: 27366; Mature: 27366

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKN
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKA
CCCCEEHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECEEECCCCCCHHHHHH
SQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIYS
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC
HHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DALKELKIEL
HHHHHHHCCC
>Mature Secondary Structure
MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKN
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKA
CCCCEEHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECEEECCCCCCHHHHHH
SQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIYS
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC
HHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DALKELKIEL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]