Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644819

GI number: 15644819

Start: 195596

End: 197104

Strand: Reverse

Name: Not Available

Synonym: HP0190

Alternate gene names: 15644819

Gene position: 197104-195596 (Counterclockwise)

Preceding gene: 15644820

Following gene: 15644817

Centisome position: 11.82

GC content: 38.44

Gene sequence:

>1509_bases
TTGAAAATCTTTTTAGTCTTTTTAAGCGTCTTTTTTTTTAATGGGTGTTTTGGGTTAGTCTATAAGACTCCCATTTCAAG
CTCTCCTATCTCTTATGATCCCTACACTACCCCCATTGGGAGCTTGTATGCTGAAAAATTAAAAGAAAACCCTAACCATA
GCGCGGCCATTCTTTTAGAAGATGGCTTTGACGCTCTGTTGCATAGAGTGGGACTTATTAGAATGAGCCAAAAAAGCATT
GACATGCAAACTTATATCTATAAAAACGACCTTTCTTCTCAAGTGATTGCTAAAGAACTTTTAAATGCGGCCAATCGTGG
GGTAAAAGTGCGCATCCTTTTAGACGATAACGGATTGGATTCGGATTTTTCAGATATTATGCTCTTAAATTTCCATAAAA
ACATTGAGGTGAAAATTTTTAACCCCTACTATATCCGCAATAAAGGCTTGCGTTATTTTGAAATGCTTGCGGATTATGAG
CGCATTAAAAAACGCATGCACAACAAGCTTTTCATCGTGGATAATTTCGCTGTCATTATAGGGGGGCGCAATATTGGGGA
CAATTATTTTGATAACGATTTAGACACGAATTTTTTAGATTTAGACGCTTTGTTTTTTGGGGGGGTTGCTTCAAAAGCCA
AAGAAAGCTTTGAACGCTATTGGAGATTCCACCGCTCTATCCCTGTTTCATTACTAAGAACCCATAAAAGACTCAAAAAC
AACGCTAAAGAAATCGCTAAACTCCATGAAAAAATCCCTATCAGCGCTGAAGACAAAAACCAGTTTGAAAAAAAAGTCAA
TGATTTTATAGATCGTTTCCAAAAATACCAATACCCCATTTATTATGGGAATGCCATTTTTTTAGCCGATTCACCCAAAA
AAATTGACACGCCCTTGTATTCGCCTATCAAAATCGCTTTTGAGAAAGCCCTTAAAAACGCTAAGGACTCCGTTTTTATC
GCTTCATCGTATTTTATTCCAGGCAAAAAGATGATGAAAATCTTTAAAAATCAAATTTCTAAGGGGATTGAATTGAACAT
CCTTACCAATTCCCTTTCATCTACTGATGCGATAGTGGTCTATGGGGCATGGGAAAGGTATCGCAACCAATTAGTGCGAA
TGGGCGCGAATGTCTATGAAATACGAAACGATTTTTTCAACCGCCAGATTAAAGGGCGCTTTAGCACCAAACATTCCTTG
CATGGCAAGACGATTGTTTTTGATGACAATTTAACGCTTCTAGGGAGTTTCAATATTGATCCGCGCTCTGCATACATCAA
CACTGAAAGCGCGGTTTTGTTTGACAACCCGTCTTTTGCTAAAAGGGTGCGTTTGTCGCTTAAAGATCATGCCCAACAAT
CATGGCATTTGGTGGTGTATCGGCATAGAGTGATTTGGGAAGCGGTGGAAGAAGGCATTTTAATCCATGAAAAAACTTCG
CCTGACACTTCCTTCTTTTTGCGCTTGATTAAAGAATGGTCTAAAGTCCTTCCTGAAAGAGAGCTTTAA

Upstream 100 bases:

>100_bases
TTGCCCTAAAGAATTACCCTTGCAAAGCAGTATCGCCACTTTGCGTAACAGGATGTTGAAAGTGGGTAAAAGCCGCTAAT
TTCTTTTTAGTGGGTCGTTT

Downstream 100 bases:

>100_bases
AACTTTTAATGCGCTTTATTTTGCGAAAAAGCGATGTTATTGGTAACGGCGGCTAAAAGCGCTGAACACACAAACACCAA
ATGGATCACCACTTGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLDSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI
ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
PDTSFFLRLIKEWSKVLPEREL

Sequences:

>Translated_502_residues
MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLDSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI
ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
PDTSFFLRLIKEWSKVLPEREL
>Mature_502_residues
MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLDSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI
ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
PDTSFFLRLIKEWSKVLPEREL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=472, Percent_Identity=32.2033898305085, Blast_Score=218, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58288; Mature: 58288

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLE
CCHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE
DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLD
CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII
CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE
GGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
ECCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCC
SPIKIAFEKALKNAKDSVFIASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVV
CHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE
YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHGKTIVFDDNLTLLGSFNID
EECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCC
PRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
CCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECCC
PDTSFFLRLIKEWSKVLPEREL
CCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLE
CCHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE
DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLD
CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII
CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE
GGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN
ECCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCC
SPIKIAFEKALKNAKDSVFIASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVV
CHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE
YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHGKTIVFDDNLTLLGSFNID
EECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCC
PRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS
CCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECCC
PDTSFFLRLIKEWSKVLPEREL
CCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]