| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644799
GI number: 15644799
Start: 176724
End: 177485
Strand: Reverse
Name: Not Available
Synonym: HP0170
Alternate gene names: NA
Gene position: 177485-176724 (Counterclockwise)
Preceding gene: 15644800
Following gene: 15644798
Centisome position: 10.64
GC content: 42.39
Gene sequence:
>762_bases ATGACACAAGAAGAATTAGACGCTTTGATGAATGGTGGCGATCTAGAAAATTTGGAAGCCCTAGAGACTAAAGAGGAGAC TAAAGAGGAAGCTAAAGAGGAGGCTAAAGAGGAGGCTAAAGAGGAGGCTAAAGAGAAAGAAGAGATTAAAGAAGAAAGCT CTAGCCAAAAAATGACCGTCAAAAAAGAAGACGCTGAAAAATACGGCAAGATTAGCCCCAATGAATGGCCTCCCCCTCCC CCCACTGAAGAGCATAAAGTCGTGCATCAATTAGATGATGTTACAAGAGATTCTGAAGTGAAAGCCACGCAAATTTTTGA TCAATTGGATTTGATCGGGGCTAGCGCTGAAAAGATCGCTAAAATGGTTAAAAAGATCCAAGAACCTTTGCAAAAACACC AAGAAATTTTTGACAATTTGCATGGCCATTTCCCCCATGTGGAATCTTTTAAAACCGCGCTCAATGAGCAGCAAGAAATC CTAAACGCCCTTAAAAGCATTGAAGAAGAAGCCGCTAATTGCTCTGATAGCTCCATGCAAGCGATGGATATTATGCAGTT TCAAGACATCCACCGCCAAAAAATTGAACGAGTGGTCAATGTCATGCGAGCGCTCAGCCAATACATGAATTCGCTTTTTG AGGGCAAAATTGATGATTCTAAGCGCGTGAGTTCAGCGACTTTTATCACCGGCGATGACGATAAAGATTTAGCCAGCGCT GATGATATTGAAGCCTTGATCGCTTCTTTTGGAGCCAAGTAG
Upstream 100 bases:
>100_bases AGGGCGTTTTGATTGCTAAAGCTTAAGTGCGCTAAAATGACAGCCGATAAATTATGGTTACTATAAAACGCTTTTTAAAA CCAATTGGCAAGGAACGACA
Downstream 100 bases:
>100_bases TTTTGAACCAAGTTGAATTACTCTCTCCAGCTGGTAATTTAAAAAAACTTAAAATCGCCCTCAACTATGGGGCTGATGCG GTTTATGGGGGAGTGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTQEELDALMNGGDLENLEALETKEETKEEAKEEAKEEAKEEAKEKEEIKEESSSQKMTVKKEDAEKYGKISPNEWPPPP PTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLQKHQEIFDNLHGHFPHVESFKTALNEQQEI LNALKSIEEEAANCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASA DDIEALIASFGAK
Sequences:
>Translated_253_residues MTQEELDALMNGGDLENLEALETKEETKEEAKEEAKEEAKEEAKEKEEIKEESSSQKMTVKKEDAEKYGKISPNEWPPPP PTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLQKHQEIFDNLHGHFPHVESFKTALNEQQEI LNALKSIEEEAANCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASA DDIEALIASFGAK >Mature_252_residues TQEELDALMNGGDLENLEALETKEETKEEAKEEAKEEAKEEAKEKEEIKEESSSQKMTVKKEDAEKYGKISPNEWPPPPP TEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLQKHQEIFDNLHGHFPHVESFKTALNEQQEIL NALKSIEEEAANCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASAD DIEALIASFGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28622; Mature: 28491
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEELDALMNGGDLENLEALETKEETKEEAKEEAKEEAKEEAKEKEEIKEESSSQKMTV CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KKEDAEKYGKISPNEWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH KMVKKIQEPLQKHQEIFDNLHGHFPHVESFKTALNEQQEILNALKSIEEEAANCSDSSMQ HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCCH DDIEALIASFGAK HHHHHHHHHHCCC >Mature Secondary Structure TQEELDALMNGGDLENLEALETKEETKEEAKEEAKEEAKEEAKEKEEIKEESSSQKMTV CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KKEDAEKYGKISPNEWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH KMVKKIQEPLQKHQEIFDNLHGHFPHVESFKTALNEQQEILNALKSIEEEAANCSDSSMQ HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCCH DDIEALIASFGAK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA