| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644715
GI number: 15644715
Start: 89957
End: 90145
Strand: Reverse
Name: Not Available
Synonym: HP0085
Alternate gene names: NA
Gene position: 90145-89957 (Counterclockwise)
Preceding gene: 15644716
Following gene: 15644714
Centisome position: 5.4
GC content: 37.04
Gene sequence:
>189_bases ATGCAAAAAGAACAAGAAGCCCAAGAAATCGCTAAAAAAGCCGTTAAAATCGTGTTTTTTTTAGGGCTTGTGGTGGTGCT TTTGATGATGATAAACCTTTACATGCTCATCAATCAAATCAACGCGAGCGCTCAAATGAGCCACCAAATCAAAAAGATAG AAGAAAGGCTTAATCAGGAGCAAAAATAA
Upstream 100 bases:
>100_bases TGTGGATTCCCAAGAAATCGCTGCGTATTTGGGCGAGAGCTTTGAATTAGAACGCTTTTATAAAGATTTATCCCCAGAAG AATTGGAAAATTAAAAACGC
Downstream 100 bases:
>100_bases AAAAGGCTTTTTGGTATTTTTACGATCAAATAGTAAAGAGCTTATCTTTAATCAAGCGGTAATTTTTTAAGCGGTCTTTT GGGGTTAGGGGGTTTTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK
Sequences:
>Translated_62_residues MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK >Mature_62_residues MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y078_HELPJ (P64652)
Other databases:
- EMBL: AE001439 - RefSeq: NP_222800.1 - STRING: P64652 - GeneID: 890388 - GenomeReviews: AE001439_GR - KEGG: hpj:jhp0078 - HOGENOM: HBG501853 - OMA: MQNEQEA - ProtClustDB: CLSK495853 - BioCyc: HPYL85963:JHP0078-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7245; Mature: 7245
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x91f9ed4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 8.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.1 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QK CH >Mature Secondary Structure MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QK CH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682