Click here to switch to the map view.

The map label for this gene is noeI

Identifier: 16519759

GI number: 16519759

Start: 441315

End: 442046

Strand: Direct

Name: noeI

Synonym: NGR_a03470

Alternate gene names: 16519759

Gene position: 441315-442046 (Clockwise)

Preceding gene: 16519760

Following gene: 16519758

Centisome position: 82.31

GC content: 53.28

Gene sequence:

>732_bases
ATGGAAGTAGGACGGTATCTTAAAGAAGGCCTGCTAATCTCTCTTCAGCAACGCCTTCGCGAATTTGCGGAGGGCATAAG
AAAGCCAACGTCTTCCTTGAAGGTCCATCGACAGATCGTTTCGCTCCTTGAAAAGCCTGACCCCGTGATTCTGGACATCG
GTTGCAATGATGGAAGCGATGCGCGACGCTTTCTCCAGCTTCGTCCGAAGGCCCAGCTTTTCTGCTTTGAGCCAGACCCC
CGAGCCGCTGCTCGCTGTAGGGAAAACATGGGGCCTTTGGACAGGATGAGGCTATTTGAAGTCGCGATCAGTGATCGAAA
CGGCAGAATCGATTTCCACCCCAGTAATGGAGATGGAGACGCAAAGGAATGGGATCTGTCAGGCTCAATACGCCAGCCCA
AGAATCACCTTTCCGAATATCAGTGGGTCCGGTTTGACGGACCCATCTCAGTTGAGACTCGGAGACTGGACGATTGGTGC
AGTGAGGCTGGCTTGGAGAGTATCGACCTGATCTGGATGGATGTGCAGGGGGCCGAGTCCGACGTCATCGCTGGCGGCAA
AGAGACTCTAACCAAGACGCGCTTCATCTACACTGAATATAGTGACCAGGAGCTGTATGAAGGTCAACTGCCCCTGCGCG
CAATTCTTGACCTACTGCCTTCGTTCGAATTGGTGGCTCAGTTTCCACGCGGAGTGGAGGGTGACGTTTTGCTCAGAAAC
ACGAAGCTTTAG

Upstream 100 bases:

>100_bases
ACAGCATACCCTTGAGGATTCACCGAAGCGCGGCACGAGCACTCAATGCCTCACCAGCGGTCAGCACCCGCAACTGCAAT
CAATATTGAGGTGTAATTTC

Downstream 100 bases:

>100_bases
CACCAGTCGGCTTGTTCTCTTCCATGTTGCGGGCTGTCCCACTGGTGCGCATCACATTTGCCGCCCTTGCTGCTTGGGAA
CGACTGCCCGGAGAAATGCT

Product: nodulation protein NoeI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MEVGRYLKEGLLISLQQRLREFAEGIRKPTSSLKVHRQIVSLLEKPDPVILDIGCNDGSDARRFLQLRPKAQLFCFEPDP
RAAARCRENMGPLDRMRLFEVAISDRNGRIDFHPSNGDGDAKEWDLSGSIRQPKNHLSEYQWVRFDGPISVETRRLDDWC
SEAGLESIDLIWMDVQGAESDVIAGGKETLTKTRFIYTEYSDQELYEGQLPLRAILDLLPSFELVAQFPRGVEGDVLLRN
TKL

Sequences:

>Translated_243_residues
MEVGRYLKEGLLISLQQRLREFAEGIRKPTSSLKVHRQIVSLLEKPDPVILDIGCNDGSDARRFLQLRPKAQLFCFEPDP
RAAARCRENMGPLDRMRLFEVAISDRNGRIDFHPSNGDGDAKEWDLSGSIRQPKNHLSEYQWVRFDGPISVETRRLDDWC
SEAGLESIDLIWMDVQGAESDVIAGGKETLTKTRFIYTEYSDQELYEGQLPLRAILDLLPSFELVAQFPRGVEGDVLLRN
TKL
>Mature_243_residues
MEVGRYLKEGLLISLQQRLREFAEGIRKPTSSLKVHRQIVSLLEKPDPVILDIGCNDGSDARRFLQLRPKAQLFCFEPDP
RAAARCRENMGPLDRMRLFEVAISDRNGRIDFHPSNGDGDAKEWDLSGSIRQPKNHLSEYQWVRFDGPISVETRRLDDWC
SEAGLESIDLIWMDVQGAESDVIAGGKETLTKTRFIYTEYSDQELYEGQLPLRAILDLLPSFELVAQFPRGVEGDVLLRN
TKL

Specific function: Probable enzyme involved in nod factor biosynthesis

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NOEI_RHISN (P55473)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443879.1
- ProteinModelPortal:   P55473
- GeneID:   962315
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03470
- HOGENOM:   HBG364801
- ProtClustDB:   CLSK516088
- GO:   GO:0005737
- GO:   GO:0009877
- InterPro:   IPR006342
- TIGRFAMs:   TIGR01444

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27735; Mature: 27735

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVGRYLKEGLLISLQQRLREFAEGIRKPTSSLKVHRQIVSLLEKPDPVILDIGCNDGSD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
ARRFLQLRPKAQLFCFEPDPRAAARCRENMGPLDRMRLFEVAISDRNGRIDFHPSNGDGD
HHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEECCCCCCCC
AKEWDLSGSIRQPKNHLSEYQWVRFDGPISVETRRLDDWCSEAGLESIDLIWMDVQGAES
CCEECCCCCCCCCHHHHCCCCEEEECCCCCEEHHHHHHHHHHCCCCEEEEEEEECCCCCC
DVIAGGKETLTKTRFIYTEYSDQELYEGQLPLRAILDLLPSFELVAQFPRGVEGDVLLRN
CCCCCCHHHHHHEEEEEEECCCCHHHCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEC
TKL
CCC
>Mature Secondary Structure
MEVGRYLKEGLLISLQQRLREFAEGIRKPTSSLKVHRQIVSLLEKPDPVILDIGCNDGSD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
ARRFLQLRPKAQLFCFEPDPRAAARCRENMGPLDRMRLFEVAISDRNGRIDFHPSNGDGD
HHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEECCCCCCCC
AKEWDLSGSIRQPKNHLSEYQWVRFDGPISVETRRLDDWCSEAGLESIDLIWMDVQGAES
CCEECCCCCCCCCHHHHCCCCEEEECCCCCEEHHHHHHHHHHCCCCEEEEEEEECCCCCC
DVIAGGKETLTKTRFIYTEYSDQELYEGQLPLRAILDLLPSFELVAQFPRGVEGDVLLRN
CCCCCCHHHHHHEEEEEEECCCCHHHCCCCCHHHHHHHCCCHHHHHHCCCCCCCCEEEEC
TKL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424