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Identifier: 16519714

GI number: 16519714

Start: 508261

End: 508527

Strand: Direct

Name: Not Available

Synonym: NGR_a03920

Alternate gene names: NA

Gene position: 508261-508527 (Clockwise)

Preceding gene: 16519715

Following gene: 16519708

Centisome position: 94.8

GC content: 60.67

Gene sequence:

>267_bases
ATGCCTCGCCCCGGTGGTTCCTACTCAACAAGCGATCTATCCCGGAAGTCCGGCGATATCATCGCCGAGGCGTTGCGCCA
TCCGGTCACGATCACCCAACGCAACAAGCCGCGCCTCGTCCTCCTTAACATCGACGACTACGAACGGCTGATGCGGCAAT
ACGATGCCCGTTCAGTCGGCACACTCGAAACCCTGCCGGGCGAGCTGCTCAACGAATTCGAGGCGGCGGTGGACGCCTAT
GGGGAAACCGACGAGACCAATCGATGA

Upstream 100 bases:

>100_bases
ACCGCGGAAATACACAGCATTTACAACAATACTGTAAATGCCGGATTTGCGTCGGTTCTGATGCTATGGTGCCCGCCGGC
AAAGACATCTGGAGATCAAC

Downstream 100 bases:

>100_bases
GCAGCTATAATGGCATCCAGACCGCGACGGTCATCCGTTATCCCTATTTATGCGCGCGGCAAGCCCGAAAAGGAGAGATA
GAGCGGCGGAAGTATCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MPRPGGSYSTSDLSRKSGDIIAEALRHPVTITQRNKPRLVLLNIDDYERLMRQYDARSVGTLETLPGELLNEFEAAVDAY
GETDETNR

Sequences:

>Translated_88_residues
MPRPGGSYSTSDLSRKSGDIIAEALRHPVTITQRNKPRLVLLNIDDYERLMRQYDARSVGTLETLPGELLNEFEAAVDAY
GETDETNR
>Mature_87_residues
PRPGGSYSTSDLSRKSGDIIAEALRHPVTITQRNKPRLVLLNIDDYERLMRQYDARSVGTLETLPGELLNEFEAAVDAYG
ETDETNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4EA_RHISN (P55424)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443834.1
- GeneID:   962272
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03920
- HOGENOM:   HBG661526
- ProtClustDB:   CLSK861934
- InterPro:   IPR006442
- TIGRFAMs:   TIGR01552

Pfam domain/function: PF02604 PhdYeFM

EC number: NA

Molecular weight: Translated: 9896; Mature: 9765

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPGGSYSTSDLSRKSGDIIAEALRHPVTITQRNKPRLVLLNIDDYERLMRQYDARSVG
CCCCCCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCCC
TLETLPGELLNEFEAAVDAYGETDETNR
CHHHCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PRPGGSYSTSDLSRKSGDIIAEALRHPVTITQRNKPRLVLLNIDDYERLMRQYDARSVG
CCCCCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCCC
TLETLPGELLNEFEAAVDAYGETDETNR
CHHHCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424