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The map label for this gene is rbsC

Identifier: 13507999

GI number: 13507999

Start: 311284

End: 312219

Strand: Direct

Name: rbsC

Synonym: MPN260

Alternate gene names: NA

Gene position: 311284-312219 (Clockwise)

Preceding gene: 13507998

Following gene: 13508000

Centisome position: 38.13

GC content: 41.24

Gene sequence:

>936_bases
ATGTCACAGTCTTTAATTTCTTTTAGTAACTTAGATAACTGGTTGTTTGTCGCTCCTGCACTGCTACTCGCTGTATTGAG
TGGTTACTTATCTGAGCGGGTTGGTATTGTCAATATTGCCATTAACGGGGGCATGGTGTTTGGCGGGATGTTCTTATCCT
TAATGTCTTATGCCTTTGTGCCCAATGCAAATGATTCTGCACCATCTTGATCACTAGCAATAAGCATCCCTTTAAGTGTT
ATCTTTGCCTCAGCTGTTGGTTTTCTGTTTGGCATTGCCGCCATTAAACTCAAAGCCGATCACGTGATTGTTGGCACAGG
GGTTAACTTACTGGGCACGGGAATTAATTTCTTTGTGGCACAAAATGCCCGCTCATTGCTTAACGATACTGATTTAAGGG
TACGATACAGCTTTGTAAGAACAGGAAACTCTGTAAGTATTGAGGGTATAGCAATCTTTGCCTTTGCAATTATCTTTGTT
TTATTAGTGTGGTATTTGATGAACTTTACTAAAACGGGCTTGCGTTACCGTGCTGTTGGGGAAAATCCTAATGTGATTGA
TACCCAAGGTATTAGTGTGTATAAATACCAGTGGTTTGGGGTAATGGCTTCGACGATGGTAGCAGCTTTAGCGGGTTGTT
GTTTTGCTTTAAGTCCACAGGTACCTAGCTTTTCTAGCGGGGATGTGAGCGGGTTTGGTTTTATTGCCATTGCCATTATG
ATCATTTCGATGTGACGAATTATCCCAAGTATTGTGATCTCGCCCTTGTTTGCACTAGCTTATGTGCTTACTACCGGTGT
GGTAGGTAATGCTAATAACACTTACTTATTGAGAACTATTCCGTTTATTATTTCGCTGTTGGTAATGATGGTATTTGGAT
ATCTCAATGTAGGGCCGAAAAACGTTGGTAAGCATTTCGATAAGGGTTTGCGATAG

Upstream 100 bases:

>100_bases
TCTTACGCTGGTACAAGGGCAAGAACAAAAAGCAAACAGCACTAGAAAATGAGTTTGCTAGTTTAAACGAAGCTATTAGT
CAAAAATTGGAGGAGAAATA

Downstream 100 bases:

>100_bases
GTTAACCTTTATTTATAGTTATAGTCAAGCCAACAAATGAGTAAAAATCTGGTGGTGATTGAATCACCCAATAAAGTTAA
AACGTTGCAAAAATATTTAC

Product: sugar (ribose/galactose) ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSQSLISFSNLDNWLFVAPALLLAVLSGYLSERVGIVNIAINGGMVFGGMFLSLMSYAFVPNANDSAPSWSLAISIPLSV
IFASAVGFLFGIAAIKLKADHVIVGTGVNLLGTGINFFVAQNARSLLNDTDLRVRYSFVRTGNSVSIEGIAIFAFAIIFV
LLVWYLMNFTKTGLRYRAVGENPNVIDTQGISVYKYQWFGVMASTMVAALAGCCFALSPQVPSFSSGDVSGFGFIAIAIM
IISMWRIIPSIVISPLFALAYVLTTGVVGNANNTYLLRTIPFIISLLVMMVFGYLNVGPKNVGKHFDKGLR

Sequences:

>Translated_311_residues
MSQSLISFSNLDNWLFVAPALLLAVLSGYLSERVGIVNIAINGGMVFGGMFLSLMSYAFVPNANDSAPS*SLAISIPLSV
IFASAVGFLFGIAAIKLKADHVIVGTGVNLLGTGINFFVAQNARSLLNDTDLRVRYSFVRTGNSVSIEGIAIFAFAIIFV
LLVWYLMNFTKTGLRYRAVGENPNVIDTQGISVYKYQWFGVMASTMVAALAGCCFALSPQVPSFSSGDVSGFGFIAIAIM
IISM*RIIPSIVISPLFALAYVLTTGVVGNANNTYLLRTIPFIISLLVMMVFGYLNVGPKNVGKHFDKGLR
>Mature_310_residues
SQSLISFSNLDNWLFVAPALLLAVLSGYLSERVGIVNIAINGGMVFGGMFLSLMSYAFVPNANDSAPS*SLAISIPLSVI
FASAVGFLFGIAAIKLKADHVIVGTGVNLLGTGINFFVAQNARSLLNDTDLRVRYSFVRTGNSVSIEGIAIFAFAIIFVL
LVWYLMNFTKTGLRYRAVGENPNVIDTQGISVYKYQWFGVMASTMVAALAGCCFALSPQVPSFSSGDVSGFGFIAIAIMI
ISM*RIIPSIVISPLFALAYVLTTGVVGNANNTYLLRTIPFIISLLVMMVFGYLNVGPKNVGKHFDKGLR

Specific function: Unknown

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33085; Mature: 32953

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSLISFSNLDNWLFVAPALLLAVLSGYLSERVGIVNIAINGGMVFGGMFLSLMSYAFV
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHCC
PNANDSAPSSLAISIPLSVIFASAVGFLFGIAAIKLKADHVIVGTGVNLLGTGINFFVAQ
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHCCHHHEEHH
NARSLLNDTDLRVRYSFVRTGNSVSIEGIAIFAFAIIFVLLVWYLMNFTKTGLRYRAVGE
HHHHHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
NPNVIDTQGISVYKYQWFGVMASTMVAALAGCCFALSPQVPSFSSGDVSGFGFIAIAIMI
CCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ISMRIIPSIVISPLFALAYVLTTGVVGNANNTYLLRTIPFIISLLVMMVFGYLNVGPKNV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHH
GKHFDKGLR
HHHHHCCCC
>Mature Secondary Structure 
SQSLISFSNLDNWLFVAPALLLAVLSGYLSERVGIVNIAINGGMVFGGMFLSLMSYAFV
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHCC
PNANDSAPSSLAISIPLSVIFASAVGFLFGIAAIKLKADHVIVGTGVNLLGTGINFFVAQ
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHCCHHHEEHH
NARSLLNDTDLRVRYSFVRTGNSVSIEGIAIFAFAIIFVLLVWYLMNFTKTGLRYRAVGE
HHHHHHCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
NPNVIDTQGISVYKYQWFGVMASTMVAALAGCCFALSPQVPSFSSGDVSGFGFIAIAIMI
CCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ISMRIIPSIVISPLFALAYVLTTGVVGNANNTYLLRTIPFIISLLVMMVFGYLNVGPKNV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHH
GKHFDKGLR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]