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The map label for this gene is 13507994

Identifier: 13507994

GI number: 13507994

Start: 305565

End: 306320

Strand: Direct

Name: 13507994

Synonym: MPN255

Alternate gene names: NA

Gene position: 305565-306320 (Clockwise)

Preceding gene: 13507993

Following gene: 13507995

Centisome position: 37.43

GC content: 40.08

Gene sequence:

>756_bases
ATGCAGCGTACTTTAAATGTTGGGGTGATCCTGTGTGAAAGCTTTATTTCCAACGCCCAAAACCCAGTTAACTCCTACAT
TAAGATTTACGAAAACGTGAGGATGTTTGAGTTTGCGATTAAGCTACTTCAAGAATCGCGAATTAACTTCCAAAAGATCC
TTTTATACGTTTTGGAAGAGCAAATTCCACTTGTGGAAAAAGTAGTTGCCAAGTACGAAAACTGCTGGGTCTTTCGTTCC
AAGCACAACGAGGTTGAGGACATTTATGAAGCCAAGGGCTTTATTGAAGACAAGTACAAAATTGGTTTAAAAAGTTCTAA
AAACCAAGCCTCTTCGTATTATGACAACTGTTGTTTTGTTGTCTTGGAAGCATGTCGACCTTTAACTTCTAAGAAGGTTG
TTAAAAACGTGTATGAAAAGGCAATGATTGACGGTGCCGCTGTAGCTGTACTACCGTTTGAAAGGCAGCTTGTTTGTGGT
GATAATACTAAGGCGGTGCGCCAGTTAAAGGACAAGGGCAACATGAACTATTGGCGTCAAAGTAGTACTTGGGAGTTGCA
ATTTCCCCAGGCTTATACGCTCAATAAGTTAAACCAGTATCATAAAAACCTCTTTATGAAGGCGCGGAACATGCTTGATT
TAATGAACATTTCCGCTAAGAATCCCCTAAGCATTGTCGATGGTAGTGCTTACAGCTTTCGTGTAGTTACTAGCCTGGAC
TTTGAAATTTTGTTAGGTATTTTGCGCAATGGATAG

Upstream 100 bases:

>100_bases
AGAAACGAATTGCGCCAGCTTTTTGTGCAAAAAATCTTGCAAACAGTTGAACACATTTTAAGTGAAATTTCTTAGGTTAA
ATAAGGTTTAAGAGAACAAG

Downstream 100 bases:

>100_bases
AAAAATAGTTCAACTAATTCATAACTTTAGCGGTACAGAAAAACTAAAAGCAGCTGTTTTTTCACACGACGAACAGTGTT
TCTTTGACTTTGTTAGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MQRTLNVGVILCESFISNAQNPVNSYIKIYENVRMFEFAIKLLQESRINFQKILLYVLEEQIPLVEKVVAKYENCWVFRS
KHNEVEDIYEAKGFIEDKYKIGLKSSKNQASSYYDNCCFVVLEACRPLTSKKVVKNVYEKAMIDGAAVAVLPFERQLVCG
DNTKAVRQLKDKGNMNYWRQSSTWELQFPQAYTLNKLNQYHKNLFMKARNMLDLMNISAKNPLSIVDGSAYSFRVVTSLD
FEILLGILRNG

Sequences:

>Translated_251_residues
MQRTLNVGVILCESFISNAQNPVNSYIKIYENVRMFEFAIKLLQESRINFQKILLYVLEEQIPLVEKVVAKYENCWVFRS
KHNEVEDIYEAKGFIEDKYKIGLKSSKNQASSYYDNCCFVVLEACRPLTSKKVVKNVYEKAMIDGAAVAVLPFERQLVCG
DNTKAVRQLKDKGNMNYWRQSSTWELQFPQAYTLNKLNQYHKNLFMKARNMLDLMNISAKNPLSIVDGSAYSFRVVTSLD
FEILLGILRNG
>Mature_251_residues
MQRTLNVGVILCESFISNAQNPVNSYIKIYENVRMFEFAIKLLQESRINFQKILLYVLEEQIPLVEKVVAKYENCWVFRS
KHNEVEDIYEAKGFIEDKYKIGLKSSKNQASSYYDNCCFVVLEACRPLTSKKVVKNVYEKAMIDGAAVAVLPFERQLVCG
DNTKAVRQLKDKGNMNYWRQSSTWELQFPQAYTLNKLNQYHKNLFMKARNMLDLMNISAKNPLSIVDGSAYSFRVVTSLD
FEILLGILRNG

Specific function: Unknown

COG id: COG1211

COG function: function code I; 4-diphosphocytidyl-2-methyl-D-erithritol synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y255_MYCPN (P75519)

Other databases:

- EMBL:   U00089
- PIR:   S73904
- RefSeq:   NP_109943.1
- ProteinModelPortal:   P75519
- GeneID:   876842
- GenomeReviews:   U00089_GR
- KEGG:   mpn:MPN255
- HOGENOM:   HBG130024
- OMA:   IVDGSAY
- ProtClustDB:   CLSK542153
- BioCyc:   MPNE272634:MPN255-MONOMER
- InterPro:   IPR001228

Pfam domain/function: PF01128 IspD

EC number: NA

Molecular weight: Translated: 29048; Mature: 29048

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTLNVGVILCESFISNAQNPVNSYIKIYENVRMFEFAIKLLQESRINFQKILLYVLEE
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QIPLVEKVVAKYENCWVFRSKHNEVEDIYEAKGFIEDKYKIGLKSSKNQASSYYDNCCFV
CCCHHHHHHHHHHHCEEECCCCCHHHHHHHHHCCCCHHHEECCCCCCCHHHHHHHHHHHH
VLEACRPLTSKKVVKNVYEKAMIDGAAVAVLPFERQLVCGDNTKAVRQLKDKGNMNYWRQ
HHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCHHHHHHHHHCCCCCEECC
SSTWELQFPQAYTLNKLNQYHKNLFMKARNMLDLMNISAKNPLSIVDGSAYSFRVVTSLD
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCC
FEILLGILRNG
HHHHHHHHHCC
>Mature Secondary Structure
MQRTLNVGVILCESFISNAQNPVNSYIKIYENVRMFEFAIKLLQESRINFQKILLYVLEE
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QIPLVEKVVAKYENCWVFRSKHNEVEDIYEAKGFIEDKYKIGLKSSKNQASSYYDNCCFV
CCCHHHHHHHHHHHCEEECCCCCHHHHHHHHHCCCCHHHEECCCCCCCHHHHHHHHHHHH
VLEACRPLTSKKVVKNVYEKAMIDGAAVAVLPFERQLVCGDNTKAVRQLKDKGNMNYWRQ
HHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCHHHHHHHHHCCCCCEECC
SSTWELQFPQAYTLNKLNQYHKNLFMKARNMLDLMNISAKNPLSIVDGSAYSFRVVTSLD
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCC
FEILLGILRNG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633