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The map label for this gene is pepF [H]

Identifier: 13507936

GI number: 13507936

Start: 236529

End: 238364

Strand: Direct

Name: pepF [H]

Synonym: MPN197

Alternate gene names: 13507936

Gene position: 236529-238364 (Clockwise)

Preceding gene: 13507935

Following gene: 13507937

Centisome position: 28.97

GC content: 40.2

Gene sequence:

>1836_bases
ATGAATAACCAATACAACTGAAACCTCGAAGTTTTACTAAATGGTAAGAGTTTAGCTGATAACTTTACCGAACTCAAACA
ACTCAGTGAGCAGGAAAAAGCACTTTACGATGGTGGTGCTTGCTTTCAAACCAAAGCTAAGTTCACCGAATTTTTACAAC
TACAAGAAAAGATTGAGGTCTTAGAAAACCGTTACAGCAATTTTTTGAGTAACAAGCACGCTGAAAACAGTTTGGACAAA
ACGATTAACGACGCTTTATTTCAGTACGAAATGTTTAAAAGTGAACATGCCTTGGTGTTTGTTGACTTTGAAAAGAACCT
GTTTAAGCACGAAAAGGTGATTCGCGCATACCTCCAAGACCCTGCTTTAAAACAATACCAAAGGGATTTTGAACTAGTAT
GACGGAACAAGAAACACCAAATTGATCCCGCTAGTCAAAAGTTGTTAGCGCAAATTAGTCCGGCATGAAACCAAGCGGAC
AAGATCTTTAATGTGTTATCTACCGCTGACCTAAACCTCCAACCAGTCGTATACAAGGGTAAAACTTACGTTATTAACGC
GGTTAGTGATTATCAAAGTCTCTTGGAAAATAAGGATCGTGGCCTGCGTGAAGCTGCTTACAAAGTGTGGTTGGAAATTT
ACTGACCCACACGCAATACCTTGAGTGTGAGTTTAGTGGAAAACTACATCCAATTAGAAACCTTTGCTAAGTTAAAGAAA
CACCCCAATTACATTGCCAAAACAGCTTTTGATGATGAAATTGATGTGGCTTTCATTGACTTTGTTTATGAGCAAGTGGC
TAGCTTTGCCCCGACCTTTAAAGCCTTTCAAAGTTTAAGGAAGCAAATTTACAAGCACGTTTTAAAACTAGACAAAGCCC
AACCCTGGGACTTGTCGGTACCGTTGTTTAAGGCTAGTGGTGACTACACCATTGAACAAGCCCAAACTGATGCGCTTAAG
ATATTAGCACCTATGGGTAGTGAATACCTGGAAGTGGTAAAGGAAGCCTTTCGGGAGCGCTGAATTTCCTGGTTACCCGA
TAAGAACAAGTATACCGGGGCTTACTCAATTTCCAACGTTAAGGGTTTAGATCATTACTTCATTTTGATGAATTTTGATA
AAACCCGCGCTTCATTAAATACCCTAGTCCATGAATTGGGTCACAGTGTCCATTCTTGGTATGCATCTAAGTACCAAACG
CAAAACTTGGATCCTACAATTTTCTATGCTGAAATTGCTTCCATTTGTAACGAATTACTGTTGTGTTACCACGACATTAT
TAACTATGAAAACCGCAATCCGCAGCAGTTAATCCGTAGTTTAATGGAACAAATTAGCCACTTCTTTGGCGCTACCACGA
GACAGTTAATGTTCTCTCAGTTTGAACAAGACACCTTAAAGTTAATTCAGCAAAACCAAAAGCCTGACTTTAAGACCCTA
GTGGAAATTTATGGTAAGACCGCCATTAAGTACCAAGCTGCTAATGCTGACGCTATTACGAAAAAGCTCAAGCAAACCAA
GTACCAAAAGTCATTGGCTTACATTACCTCCATTCCGCATTTTTACGCTGGTAACTTCTATGTTTACAAGTACGCCATTG
GTCAAGTTGTGGGTACCTTAGTTGGTAAAAAACTGAGTGCTGGTGACAGTAATATGCTCGCTGCTTACAAGCGCTTCTTG
TCTTCAGGCTCCACCTTACCACCACTAGAAACAATTAAATTGTTAGGGATTGACCTTACCCAACCAGAACCGTGACAAGA
AGCCCATGCGGAGTTAAAGCGCTGGATTAAACTAGTACAAACAGCCTTTAAACAGCTGCAACACAAAAAGCGCTAG

Upstream 100 bases:

>100_bases
CTGATGCGAGAAACAGTTCAACAGCTGTTTGATCAACCACAAAAGGGTGGGTGTAAGGTTAAAGCCCCCGCTTGTGGTCT
TTATTTAAAAACTGTCTTAT

Downstream 100 bases:

>100_bases
TGCATTACTTTAACCGCGCCAAAAAGGCAAAGAACAATGAGTTTTATACCTTGTTTGAAGACATTGCCGCTGAAGTGGCA
TGTTATCCCAATGCCTTTAA

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MNNQYNWNLEVLLNGKSLADNFTELKQLSEQEKALYDGGACFQTKAKFTEFLQLQEKIEVLENRYSNFLSNKHAENSLDK
TINDALFQYEMFKSEHALVFVDFEKNLFKHEKVIRAYLQDPALKQYQRDFELVWRNKKHQIDPASQKLLAQISPAWNQAD
KIFNVLSTADLNLQPVVYKGKTYVINAVSDYQSLLENKDRGLREAAYKVWLEIYWPTRNTLSVSLVENYIQLETFAKLKK
HPNYIAKTAFDDEIDVAFIDFVYEQVASFAPTFKAFQSLRKQIYKHVLKLDKAQPWDLSVPLFKASGDYTIEQAQTDALK
ILAPMGSEYLEVVKEAFRERWISWLPDKNKYTGAYSISNVKGLDHYFILMNFDKTRASLNTLVHELGHSVHSWYASKYQT
QNLDPTIFYAEIASICNELLLCYHDIINYENRNPQQLIRSLMEQISHFFGATTRQLMFSQFEQDTLKLIQQNQKPDFKTL
VEIYGKTAIKYQAANADAITKKLKQTKYQKSLAYITSIPHFYAGNFYVYKYAIGQVVGTLVGKKLSAGDSNMLAAYKRFL
SSGSTLPPLETIKLLGIDLTQPEPWQEAHAELKRWIKLVQTAFKQLQHKKR

Sequences:

>Translated_611_residues
MNNQYN*NLEVLLNGKSLADNFTELKQLSEQEKALYDGGACFQTKAKFTEFLQLQEKIEVLENRYSNFLSNKHAENSLDK
TINDALFQYEMFKSEHALVFVDFEKNLFKHEKVIRAYLQDPALKQYQRDFELV*RNKKHQIDPASQKLLAQISPA*NQAD
KIFNVLSTADLNLQPVVYKGKTYVINAVSDYQSLLENKDRGLREAAYKVWLEIY*PTRNTLSVSLVENYIQLETFAKLKK
HPNYIAKTAFDDEIDVAFIDFVYEQVASFAPTFKAFQSLRKQIYKHVLKLDKAQPWDLSVPLFKASGDYTIEQAQTDALK
ILAPMGSEYLEVVKEAFRER*ISWLPDKNKYTGAYSISNVKGLDHYFILMNFDKTRASLNTLVHELGHSVHSWYASKYQT
QNLDPTIFYAEIASICNELLLCYHDIINYENRNPQQLIRSLMEQISHFFGATTRQLMFSQFEQDTLKLIQQNQKPDFKTL
VEIYGKTAIKYQAANADAITKKLKQTKYQKSLAYITSIPHFYAGNFYVYKYAIGQVVGTLVGKKLSAGDSNMLAAYKRFL
SSGSTLPPLETIKLLGIDLTQPEP*QEAHAELKRWIKLVQTAFKQLQHKKR
>Mature_611_residues
MNNQYN*NLEVLLNGKSLADNFTELKQLSEQEKALYDGGACFQTKAKFTEFLQLQEKIEVLENRYSNFLSNKHAENSLDK
TINDALFQYEMFKSEHALVFVDFEKNLFKHEKVIRAYLQDPALKQYQRDFELV*RNKKHQIDPASQKLLAQISPA*NQAD
KIFNVLSTADLNLQPVVYKGKTYVINAVSDYQSLLENKDRGLREAAYKVWLEIY*PTRNTLSVSLVENYIQLETFAKLKK
HPNYIAKTAFDDEIDVAFIDFVYEQVASFAPTFKAFQSLRKQIYKHVLKLDKAQPWDLSVPLFKASGDYTIEQAQTDALK
ILAPMGSEYLEVVKEAFRER*ISWLPDKNKYTGAYSISNVKGLDHYFILMNFDKTRASLNTLVHELGHSVHSWYASKYQT
QNLDPTIFYAEIASICNELLLCYHDIINYENRNPQQLIRSLMEQISHFFGATTRQLMFSQFEQDTLKLIQQNQKPDFKTL
VEIYGKTAIKYQAANADAITKKLKQTKYQKSLAYITSIPHFYAGNFYVYKYAIGQVVGTLVGKKLSAGDSNMLAAYKRFL
SSGSTLPPLETIKLLGIDLTQPEP*QEAHAELKRWIKLVQTAFKQLQHKKR

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69734; Mature: 69734

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQYNNLEVLLNGKSLADNFTELKQLSEQEKALYDGGACFQTKAKFTEFLQLQEKIEVL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ENRYSNFLSNKHAENSLDKTINDALFQYEMFKSEHALVFVDFEKNLFKHEKVIRAYLQDP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCH
ALKQYQRDFELVRNKKHQIDPASQKLLAQISPANQADKIFNVLSTADLNLQPVVYKGKTY
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCEE
VINAVSDYQSLLENKDRGLREAAYKVWLEIYPTRNTLSVSLVENYIQLETFAKLKKHPNY
EEECHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHCCCH
IAKTAFDDEIDVAFIDFVYEQVASFAPTFKAFQSLRKQIYKHVLKLDKAQPWDLSVPLFK
HHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
ASGDYTIEQAQTDALKILAPMGSEYLEVVKEAFRERISWLPDKNKYTGAYSISNVKGLDH
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCE
YFILMNFDKTRASLNTLVHELGHSVHSWYASKYQTQNLDPTIFYAEIASICNELLLCYHD
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IINYENRNPQQLIRSLMEQISHFFGATTRQLMFSQFEQDTLKLIQQNQKPDFKTLVEIYG
HHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
KTAIKYQAANADAITKKLKQTKYQKSLAYITSIPHFYAGNFYVYKYAIGQVVGTLVGKKL
CHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHHHHHCCCC
SAGDSNMLAAYKRFLSSGSTLPPLETIKLLGIDLTQPEPQEAHAELKRWIKLVQTAFKQL
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QHKKR
HHCCC
>Mature Secondary Structure
MNNQYNNLEVLLNGKSLADNFTELKQLSEQEKALYDGGACFQTKAKFTEFLQLQEKIEVL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ENRYSNFLSNKHAENSLDKTINDALFQYEMFKSEHALVFVDFEKNLFKHEKVIRAYLQDP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCH
ALKQYQRDFELVRNKKHQIDPASQKLLAQISPANQADKIFNVLSTADLNLQPVVYKGKTY
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCEE
VINAVSDYQSLLENKDRGLREAAYKVWLEIYPTRNTLSVSLVENYIQLETFAKLKKHPNY
EEECHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHCCCH
IAKTAFDDEIDVAFIDFVYEQVASFAPTFKAFQSLRKQIYKHVLKLDKAQPWDLSVPLFK
HHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
ASGDYTIEQAQTDALKILAPMGSEYLEVVKEAFRERISWLPDKNKYTGAYSISNVKGLDH
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCE
YFILMNFDKTRASLNTLVHELGHSVHSWYASKYQTQNLDPTIFYAEIASICNELLLCYHD
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IINYENRNPQQLIRSLMEQISHFFGATTRQLMFSQFEQDTLKLIQQNQKPDFKTLVEIYG
HHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
KTAIKYQAANADAITKKLKQTKYQKSLAYITSIPHFYAGNFYVYKYAIGQVVGTLVGKKL
CHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHHHHHCCCC
SAGDSNMLAAYKRFLSSGSTLPPLETIKLLGIDLTQPEPQEAHAELKRWIKLVQTAFKQL
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QHKKR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8604303; 8948633 [H]