Click here to switch to the map view.

The map label for this gene is 13507934

Identifier: 13507934

GI number: 13507934

Start: 234508

End: 235812

Strand: Direct

Name: 13507934

Synonym: MPN195

Alternate gene names: NA

Gene position: 234508-235812 (Clockwise)

Preceding gene: 13507933

Following gene: 13507935

Centisome position: 28.72

GC content: 40.77

Gene sequence:

>1305_bases
ATGGATAGTTTTTTTATTAATGGTTATGTACCACGAGATACCTTTATCCACCGGCTCCACCCGACAACGAAACTGTTAAT
CTTTTTGCTGTTCGTGATCCTGGTGTTTGTACCCATTGGCTTTGTTTTTCAAAGTGTGATCTTTGTCTTTGCCACAGTTA
TTTTCTTTGTAGCCAAACTACCCGGACGGTTTTACCTCTCCTCGATTAAGTCAATCTCACTGTTATTCTTACTACTGTTA
TTTGTCAACTGGTTTACCTTCCGTGACCCCGGGTTCTACATTACCGCTGATCAGGTTAATACAGTAAAACCACACTTTAA
CGGTAATAACTTTAACTTCTGAAACATCTCCCTGTTTAACTATCAGGACAATGTGTTTTCGCAAGTGTTTAACTTTAACC
GTGCCAACATGACAGAGTTAAACAAGATTAACTTCTTCTTTAAGGAAACAGCTAATGCTAATGCATACACCAAGGTAACG
GGGATTGATAAATTGGCAGAAATGTTGGCTTCAAAGAATCTCTTTAAGTTCAACGGTTCTACCAATGGCATTGATAAAAA
CAAGATTCTTGGTGCCTTTCTAGATCATAAGATTGCCGTTTACCTCGGTCGTAGTTGGGGTGGTGACTTTAGTGGTTTTG
TGATTGACGTAAGTGTAAGTGATAAAACATCTACCTTCACGATTAAACCCTTTTTAGCTAACTCGAACTATGTGTTGACA
CTGCGTGCCATTATTCTAGCCTTTTACGTTACCCAAAAGATCTTGATCATGATCATTTTGGCAACAGTGTTAACTTCCAC
TTCAAGCTCGGTTGAGTTGGCATACGGAATTGAACGCTTGCTGTGACCGTTGAAGCTGTTACGGGTTCCAGTCAATGTGT
TTGCGATGACAATTGCAATTGCAATTCGCTTTGTCCCTTCTTTATTGTTGGAATCACAACGGATTTTAAATGCCCAAGCA
TCACGCGGTTTGGACTTTAAGAACGGCAATTTCTTTGTCAAAATGCGTTCATTGTCTTCCTTGGTTGTACCGATGATTTC
GATTGCATTCCGCAATGCTGGGGAGTTGGCGAGTGCCATGGAAGCACGTGGTTATGATCCAACTAAGAAACGTACTACCT
ACCGCAAGTTTAAGATTGATTGGGTTGATGCCACAGCTTTAATTCTCACCGCTCTTTACTTTGTGGTGATTATTTTCTTA
ACCGTTAAGGGTGCAGTGTTCCTAGATTTAGGGACACCTGAGTGGTTGCTAACCGGCAAGATTAAAGAGCAGGTAGAGCG
CTCATTATCAGTTAAAAGTGCCTAG

Upstream 100 bases:

>100_bases
AAAGACCTAATTAACTTAAACCCGAAGTTTAGTTGTTTATTAGACTTTAAACCGCGCAACTTAGACCAGTTGGCGGATGC
CATTAACAACACAATAGCTC

Downstream 100 bases:

>100_bases
GTACTTAGCGATTGTCGCTTACAATGGTGCTCCCTTTCGTGGTTGAGCCAAACAACCGGGTTACCACACCGTTCAGGGTC
AAATAGAACAAAACCTAGCC

Product: cobalt ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MDSFFINGYVPRDTFIHRLHPTTKLLIFLLFVILVFVPIGFVFQSVIFVFATVIFFVAKLPGRFYLSSIKSISLLFLLLL
FVNWFTFRDPGFYITADQVNTVKPHFNGNNFNFWNISLFNYQDNVFSQVFNFNRANMTELNKINFFFKETANANAYTKVT
GIDKLAEMLASKNLFKFNGSTNGIDKNKILGAFLDHKIAVYLGRSWGGDFSGFVIDVSVSDKTSTFTIKPFLANSNYVLT
LRAIILAFYVTQKILIMIILATVLTSTSSSVELAYGIERLLWPLKLLRVPVNVFAMTIAIAIRFVPSLLLESQRILNAQA
SRGLDFKNGNFFVKMRSLSSLVVPMISIAFRNAGELASAMEARGYDPTKKRTTYRKFKIDWVDATALILTALYFVVIIFL
TVKGAVFLDLGTPEWLLTGKIKEQVERSLSVKSA

Sequences:

>Translated_434_residues
MDSFFINGYVPRDTFIHRLHPTTKLLIFLLFVILVFVPIGFVFQSVIFVFATVIFFVAKLPGRFYLSSIKSISLLFLLLL
FVNWFTFRDPGFYITADQVNTVKPHFNGNNFNF*NISLFNYQDNVFSQVFNFNRANMTELNKINFFFKETANANAYTKVT
GIDKLAEMLASKNLFKFNGSTNGIDKNKILGAFLDHKIAVYLGRSWGGDFSGFVIDVSVSDKTSTFTIKPFLANSNYVLT
LRAIILAFYVTQKILIMIILATVLTSTSSSVELAYGIERLL*PLKLLRVPVNVFAMTIAIAIRFVPSLLLESQRILNAQA
SRGLDFKNGNFFVKMRSLSSLVVPMISIAFRNAGELASAMEARGYDPTKKRTTYRKFKIDWVDATALILTALYFVVIIFL
TVKGAVFLDLGTPEWLLTGKIKEQVERSLSVKSA
>Mature_434_residues
MDSFFINGYVPRDTFIHRLHPTTKLLIFLLFVILVFVPIGFVFQSVIFVFATVIFFVAKLPGRFYLSSIKSISLLFLLLL
FVNWFTFRDPGFYITADQVNTVKPHFNGNNFNF*NISLFNYQDNVFSQVFNFNRANMTELNKINFFFKETANANAYTKVT
GIDKLAEMLASKNLFKFNGSTNGIDKNKILGAFLDHKIAVYLGRSWGGDFSGFVIDVSVSDKTSTFTIKPFLANSNYVLT
LRAIILAFYVTQKILIMIILATVLTSTSSSVELAYGIERLL*PLKLLRVPVNVFAMTIAIAIRFVPSLLLESQRILNAQA
SRGLDFKNGNFFVKMRSLSSLVVPMISIAFRNAGELASAMEARGYDPTKKRTTYRKFKIDWVDATALILTALYFVVIIFL
TVKGAVFLDLGTPEWLLTGKIKEQVERSLSVKSA

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 48729; Mature: 48729

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFFINGYVPRDTFIHRLHPTTKLLIFLLFVILVFVPIGFVFQSVIFVFATVIFFVAKL
CCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGRFYLSSIKSISLLFLLLLFVNWFTFRDPGFYITADQVNTVKPHFNGNNFNFNISLFNY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEEEEEC
QDNVFSQVFNFNRANMTELNKINFFFKETANANAYTKVTGIDKLAEMLASKNLFKFNGST
CHHHHHHHHCCCCCCCCHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHCCCEEEECCCC
NGIDKNKILGAFLDHKIAVYLGRSWGGDFSGFVIDVSVSDKTSTFTIKPFLANSNYVLTL
CCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEHH
RAIILAFYVTQKILIMIILATVLTSTSSSVELAYGIERLLPLKLLRVPVNVFAMTIAIAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVPSLLLESQRILNAQASRGLDFKNGNFFVKMRSLSSLVVPMISIAFRNAGELASAMEA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHH
RGYDPTKKRTTYRKFKIDWVDATALILTALYFVVIIFLTVKGAVFLDLGTPEWLLTGKIK
CCCCCCHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHH
EQVERSLSVKSA
HHHHHHCCCCCC
>Mature Secondary Structure
MDSFFINGYVPRDTFIHRLHPTTKLLIFLLFVILVFVPIGFVFQSVIFVFATVIFFVAKL
CCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGRFYLSSIKSISLLFLLLLFVNWFTFRDPGFYITADQVNTVKPHFNGNNFNFNISLFNY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEEEEEC
QDNVFSQVFNFNRANMTELNKINFFFKETANANAYTKVTGIDKLAEMLASKNLFKFNGST
CHHHHHHHHCCCCCCCCHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHCCCEEEECCCC
NGIDKNKILGAFLDHKIAVYLGRSWGGDFSGFVIDVSVSDKTSTFTIKPFLANSNYVLTL
CCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEHH
RAIILAFYVTQKILIMIILATVLTSTSSSVELAYGIERLLPLKLLRVPVNVFAMTIAIAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVPSLLLESQRILNAQASRGLDFKNGNFFVKMRSLSSLVVPMISIAFRNAGELASAMEA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHH
RGYDPTKKRTTYRKFKIDWVDATALILTALYFVVIIFLTVKGAVFLDLGTPEWLLTGKIK
CCCCCCHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHH
EQVERSLSVKSA
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8604303; 8948633 [H]