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The map label for this gene is rpmC [H]

Identifier: 13507912

GI number: 13507912

Start: 223036

End: 223371

Strand: Direct

Name: rpmC [H]

Synonym: MPN173

Alternate gene names: 13507912

Gene position: 223036-223371 (Clockwise)

Preceding gene: 13507911

Following gene: 13507913

Centisome position: 27.32

GC content: 42.56

Gene sequence:

>336_bases
ATGACCGTTGCAAAAGAATTACGCCAAAAGAGTTCCGAAGAGTTGGTAAAACTCGTGATTAAGCTCAAAGGGGAACTGTT
AGAGTACCGCTTTAAGTTAGCACACGGGGAGCTAGACAAACCGCACTTAATTAACCAAACCAGGCGGTTATTGGCTACCA
TTTTAACGATTCTTACCGAGCGTAAGTTGAACTGACAAGAAGAACAAGCTAAGTACAAACTGCTCACTAAAAAAACGAAC
GAAGCAGCTGTGAATGCTTGGAAGCAACACCTAGAAGCTAACAAAGCGAAGCTGTTAAAGTCACGTGCTAAACGCGAGGA
TGCTAGCAAGAAATAA

Upstream 100 bases:

>100_bases
CTAACATCCCTGAAAGCCAAATGATTAAGGCTCTAACCCGTGCTGGTCACAAGTTACCCGTGACCTGAAAGATTCTCAAA
CGCGAGGAGGTAAGTGCATA

Downstream 100 bases:

>100_bases
TGAAACGTAATCAAAGAAAGGTCCTAATTGGGATTGTTAAAAGTACTAAAAACGCCAAGACCGCTACGGTTCAAGTAGAA
TCACGGTTTAAGCACCCTTT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTVAKELRQKSSEELVKLVIKLKGELLEYRFKLAHGELDKPHLINQTRRLLATILTILTERKLNWQEEQAKYKLLTKKTN
EAAVNAWKQHLEANKAKLLKSRAKREDASKK

Sequences:

>Translated_111_residues
MTVAKELRQKSSEELVKLVIKLKGELLEYRFKLAHGELDKPHLINQTRRLLATILTILTERKLN*QEEQAKYKLLTKKTN
EAAVNAWKQHLEANKAKLLKSRAKREDASKK
>Mature_110_residues
TVAKELRQKSSEELVKLVIKLKGELLEYRFKLAHGELDKPHLINQTRRLLATILTILTERKLN*QEEQAKYKLLTKKTNE
AAVNAWKQHLEANKAKLLKSRAKREDASKK

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854
- InterPro:   IPR018254 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 12770; Mature: 12639

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAKELRQKSSEELVKLVIKLKGELLEYRFKLAHGELDKPHLINQTRRLLATILTILTE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RKLNQEEQAKYKLLTKKTNEAAVNAWKQHLEANKAKLLKSRAKREDASKK
HHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TVAKELRQKSSEELVKLVIKLKGELLEYRFKLAHGELDKPHLINQTRRLLATILTILTE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RKLNQEEQAKYKLLTKKTNEAAVNAWKQHLEANKAKLLKSRAKREDASKK
HHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8604303; 8948633 [H]