Click here to switch to the map view.

The map label for this gene is 13507769

Identifier: 13507769

GI number: 13507769

Start: 34469

End: 34975

Strand: Direct

Name: 13507769

Synonym: MPN030

Alternate gene names: NA

Gene position: 34469-34975 (Clockwise)

Preceding gene: 13507768

Following gene: 13507770

Centisome position: 4.22

GC content: 41.81

Gene sequence:

>507_bases
ATGTGCCCCAGTTCATTCGTACTGGTGATAAGATTGTGATTTCCACCATTGACGGGAGCTATCGTGAACGGTACAACAAG
TAAATTAACTAGAACCCAAAGACGGATTGCAATTGTGGAGTTTATCTTCGCCACGCTGTTCTTTTTACCGAAAACTGCTG
ACCAAATCCAAGCGGCCTTTTTGGACTATGATGTGCCAGAACGTCCGCTCAACGATTGGCAAAAAGAGATTGTCAAAGTC
TTTAGTGAACGTTGTGTGGAATTCATTGAACTAATTGAAAACCAACAACAACGCAACCAAGCAGAAGTACAAAGCAAGTA
CAACAAGGTTTCCGGTAAAAAAGTCGACTTATTGACTAAGGCCGTGATTCTCTGTGCTTTGAGCGAACAACACGCGCAAG
CGACTGATAAACCATTATTAATTAGTGAAGCCTTACTGATTATGGACCACTATTCCCAGGTACCCGAAAAGAAGCAAACC
CATGCTTTATTGGATAAACTCTTGTAA

Upstream 100 bases:

>100_bases
TTAGTGCCGATTGAAGTGGAATTTGCCGAAGAAGCAGTGCAAGGTAATACCGCTAACATGGCGCGTAAACGGGCTCGGTT
AGTTTCGGGTTACGAATTAG

Downstream 100 bases:

>100_bases
TGCGACGTAATTGAAGGGAACACTATAACGTGTTTGTAGCAAACCTAGCCTTAGTGTTGGGTTTTATGTTGAACATTGTG
GTGGCGCGGTATACCTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MCPSSFVLVIRLWFPPLTGAIVNGTTSKLTRTQRRIAIVEFIFATLFFLPKTADQIQAAFLDYDVPERPLNDWQKEIVKV
FSERCVEFIELIENQQQRNQAEVQSKYNKVSGKKVDLLTKAVILCALSEQHAQATDKPLLISEALLIMDHYSQVPEKKQT
HALLDKLL

Sequences:

>Translated_168_residues
MCPSSFVLVIRL*FPPLTGAIVNGTTSKLTRTQRRIAIVEFIFATLFFLPKTADQIQAAFLDYDVPERPLNDWQKEIVKV
FSERCVEFIELIENQQQRNQAEVQSKYNKVSGKKVDLLTKAVILCALSEQHAQATDKPLLISEALLIMDHYSQVPEKKQT
HALLDKLL
>Mature_168_residues
MCPSSFVLVIRL*FPPLTGAIVNGTTSKLTRTQRRIAIVEFIFATLFFLPKTADQIQAAFLDYDVPERPLNDWQKEIVKV
FSERCVEFIELIENQQQRNQAEVQSKYNKVSGKKVDLLTKAVILCALSEQHAQATDKPLLISEALLIMDHYSQVPEKKQT
HALLDKLL

Specific function: Unknown

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015268
- InterPro:   IPR006027 [H]

Pfam domain/function: PF09185 DUF1948 [H]

EC number: NA

Molecular weight: Translated: 19010; Mature: 19010

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPSSFVLVIRLFPPLTGAIVNGTTSKLTRTQRRIAIVEFIFATLFFLPKTADQIQAAFL
CCCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
DYDVPERPLNDWQKEIVKVFSERCVEFIELIENQQQRNQAEVQSKYNKVSGKKVDLLTKA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VILCALSEQHAQATDKPLLISEALLIMDHYSQVPEKKQTHALLDKLL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MCPSSFVLVIRLFPPLTGAIVNGTTSKLTRTQRRIAIVEFIFATLFFLPKTADQIQAAFL
CCCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
DYDVPERPLNDWQKEIVKVFSERCVEFIELIENQQQRNQAEVQSKYNKVSGKKVDLLTKA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VILCALSEQHAQATDKPLLISEALLIMDHYSQVPEKKQTHALLDKLL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]