Click here to switch to the map view.

The map label for this gene is mfd

Identifier: 16331597

GI number:

Start: 2701931

End: 2705530

Strand: Reverse

Name: mfd

Synonym: sll0377

Alternate gene names: NA

Gene position: NA

Preceding gene: 16331598

Following gene: 16331596

Centisome position: NA

GC content: NA

Gene sequence:

>3600_bases
ATGGCTGAGCCTAGGGCTGTCCTCAAACAGGGCAATCGGAATAGGGACAAGGATTCTGTCGGGCTGGGGAACAGGCTAAG
ATTTGTTAGTATCTCCTCTGCTCTGAACCCAATGACCTTTTCCTCCATACTCCGCCATCTGCAAACCTTACCGTTGAGCA
AAGACCTGCGGGAAAAATTGCAAAAGCGGGGCCATGTGCAACTCAGTGGCCTACCCCGGTTACCCAAAGGCCTAATCGTT
TCCAGTTTGGCCCAGTCCCTGGAGAAAAATCTTTTGGTCATCACTGCCACGTTGGAGGAAGCGGGGCGCTGGACAGCCCA
GTTGGAACTGATGGGTTGGCAAACCGTTAATTTTTACCCCACTTCTGAAGCTTCCCCCTATGACCCTGGGCGACTAGAGT
CGGAAATGGTTTGGGGACAAATGCAGGTGTTGGCAGAATTAATCCAGGGCCATCAGGTTAAGGGCAAGGCGATCGTCGCT
ACAGAAAAGGCCCTACAGCCCCATTTACCCCCGGTGGCAACCTTACGGGAATACTGTTTGGCCCTACGACGCGGTCAGGA
GATGGATAGCAAAAGTCTGGAGCTTACCCTAGCGAGGTTGGGCTACGAGCGTGGCAGTACGGTGGAAACAGAGGGGCAAT
GGAGTCGGCGGGGGGATATTGTTGATATTTTCCCAGTGTCGGCGGAGCTACCGGTGCGGCTGGAATGGTTTGGTGATGAG
TTGGAAAAAATCCGGGAGTTTGATCCTGCTAGCCAGCGTTCCTTGGATGACTTAACTGGTTTGGTGCTGACCCCCACCAG
TTTTGATCAGGTGATCGAACCGGCGTTAAATGCCCAGGCCATTGATCTCTCTGCTTGGGGAGAAGATGCGGAAACGGAGC
AATTATTCGGCAAAGAGGGATTACAGCGATTTTTGGGTCTCGCCTTTACTGAACCGGCTTGTTTATTAGATTATTTACCG
ACAGAAACAGTCTGTGTACTGGATGAACCAGAGCAATGTGCGGCCCACAGTGAACGGTGGTTTGAGGCGGTGGCCCAGGA
TTGGTCAGCTTTGCAGTTACCGAATTTACCCCAATTACATCGAAATTTTTCGGCCCTTGGCGATCGCCTAAAAACAGATT
TTCAATACATTACCCTGTCAGAAATCCACGAAGCGAATGGGGATAGTTTAGATATTTCAGCTCGACCCATCCCCACCATG
CCCCACCAGTTTGCTAAGTTGGCAGAAATTTTACGGGGGAAACGGGAAATTTATAGCGGTTTGACGTTGGGACAATACAG
CACTTGGTTGATTTCAGCCCAGCCCAGTCGTACTGTTTCTTTGTTGCAGGAACATGATTGTGCGGTGCAATTTATTGCCA
ATCCGAGGGATTATCCTGCCATTGAAAAAAGTCAGATTCAACGGACAGCGGTGACGTTAAAGTATTCAGGATTAGCGGAA
TTAGAAGGGTTTATCTTACCGACCTTTCGTTTAGTTTTAGTCACGGATCGAGAATTATTTGGTCAGCATGCTTTAGCTAC
ACCGGAATATGTGCGGAAACGGCGACGGGCTACGTCTAAACAAGTTGACATTAATAAACTTTCCCCTGGGGATTATGTAG
TCCACAAAAGTCATGGCATTGGCAAATTTTTGAAGTTGGATGCGTTGGCTAATCGGGAATATTTAATGATCCAATATGCC
GACGGCATTTTGCGGGTGCCCGCCGATAGTTTGGACAGTTTATCCCGCTTTCGCCATACGGGAACTAGACCTCCCGAACT
GCATAAAATGGGCGGTAAAGTGTGGGAAGCCACCAAAAATAAAGTCCGCAAAGCAGTTAAAAAATTGGCCGTTGATTTGC
TCAATCTTTATGCTAAGCGGGCAAAACAGGTGGGTTATGCCTATCCGCCGGATAGTCCCTGGCAACAGGAATTGGAAGAT
TCTTTCCCCTACCAACCCACCCCCGATCAACTAAAAGCAGTACAGGATGTGAAAAGGGATTTGGAAGGAGATCGCCCGAT
GGATAGATTAGTGTGTGGGGATGTGGGCTTTGGCAAAACAGAAGTGGCGGTGCGGGCCATTTTTAAGGCCGTGACCAGTG
GCAATAAACAGGTGGCTTTACTAGCTCCCACCACGGTGTTAACCCAACAGCATTACCACACCCTTAAAGAAAGATTTGCT
CCCTATCCCATCACCATTGGTTTACTGAATCGTTTTCGCACTGCTTCGGAGAAAAAGGAGATTTTAGCCAAGTTAAAAAG
TGGTGAATTAGATATTGTGGTAGGTACCCAACAGGTATTAGGTACATCGGTAAAATTTAAAGATTTAGGACTTTTAGTTA
TTGACGAAGAACAGCGCTTTGGTGTTAACCAAAAGGAAAAAATTAAGACCCTGAAAACGGAAGTAGATGTATTAACCCTA
ACGGCAACTCCCATTCCCCGTACCCTTTATATGTCCCTTTCCGGCATTCGGGAAATGAGTCTGATTACCACACCGCCACC
TTCCCGTCGCCCCATTAAAACCCATTTATCTCCCTACAATCCCGAAGTAATTCGCACCGCCATTCGTAACGAGCTAGACC
GGGGTGGGCAGGTTTTTTATGTCGTGCCTCGCATTGAAGGTATTGAGGAATTGGGAGGACAACTGCGACAAATGGTGCCC
AGTGCTCGCATTGCCATTGGTCATGGTCAAATGGAGGAATCTGAGTTGGAAAGTACTATGTTAGCTTTCAATGATGGTGA
GGCGGACATTTTAGTTTGTACTACTATCATCGAAGCTGGTTTGGATATTCCCAGGGTAAACACAATTATTGTTGAAGATG
CCCAAAAATTTGGCTTGGCCCAACTTTATCAACTGCGGGGTCGGGTAGGGCGATCGGGTATTCAAGCCCATGCTTGGTTG
CTCTATCCTAACCAAAAACAGTTAACGGAAAAAGCTAGATTAAGACTGCGGGCATTGCAAGAATTCAGCCAACTTGGTTC
CGGTTATCAACTGGCCACTAGGGATATGGAAATTCGGGGCGTAGGTAATCTTTTGGGTGCAGAACAATCGGGGCAAATGG
AGGCGATCGGTTATGAGTTTTATATGGAGATGTTGCAAGATGCCATTAAAGAAATCCAGGGTCAGGAAATTCCCAAAGTG
GAAGATACCCAAATAGATTTACCTCTCACTGCCTTTATTCCCAGCGACTACATTCCCGATTTAGAAGAAAAAATGGCCGC
CTATCGTCGCATTACTAGCATTGAATCCACTGATGAGTTGCCGAAAATTGCCTTGGATTGGGGCGATCGGTATGGTATGT
TACCAAGTCCGGTGGAGGAATTATTTAAAGTGGTTAAGCTCAAGCATTTAGCCAAATCCTTAGGCTTTTCTCGCATTAAA
GTGGAGGGTAAACAAAATCTTGTCTTGGAAACGCCCATGGAGGAACCCGCTTGGAAATTATTAGCGGAAAATTTACCCAA
TCATCTCCAGTCCCGCTTTGTTTACAGTGCCAAAAAAGTGGTGGTGCGGGGTTTAGGAGTGTTGGCCCCAGCTAAGCAAA
TGGATAATTTAATTGACTGGTTTGGCAAGATGCAAGGGGCTTTACCAGAAACAAAAATGGAAACTTTAGTGGGTAAATAG

Upstream 100 bases:

>100_bases
TTGCTAGGAGTTGGGATGGGGTTCTTGCTGTACCTGTTTTTGATAACTGAACAAGGGCAAAAGTTTTCCTAGGGGTCGAC
CTTACTAGGGATGATTGGCC

Downstream 100 bases:

>100_bases
CCTCTGGTAAAATGTTAAAAATTTGACGTGAATGACGTAAGAACGTGTTTAAAAAGTTTTATTCCGCCCCCTAAATTCCC
CAATAATGGGGGACTTTCAC

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1199_residues
MAEPRAVLKQGNRNRDKDSVGLGNRLRFVSISSALNPMTFSSILRHLQTLPLSKDLREKLQKRGHVQLSGLPRLPKGLIV
SSLAQSLEKNLLVITATLEEAGRWTAQLELMGWQTVNFYPTSEASPYDPGRLESEMVWGQMQVLAELIQGHQVKGKAIVA
TEKALQPHLPPVATLREYCLALRRGQEMDSKSLELTLARLGYERGSTVETEGQWSRRGDIVDIFPVSAELPVRLEWFGDE
LEKIREFDPASQRSLDDLTGLVLTPTSFDQVIEPALNAQAIDLSAWGEDAETEQLFGKEGLQRFLGLAFTEPACLLDYLP
TETVCVLDEPEQCAAHSERWFEAVAQDWSALQLPNLPQLHRNFSALGDRLKTDFQYITLSEIHEANGDSLDISARPIPTM
PHQFAKLAEILRGKREIYSGLTLGQYSTWLISAQPSRTVSLLQEHDCAVQFIANPRDYPAIEKSQIQRTAVTLKYSGLAE
LEGFILPTFRLVLVTDRELFGQHALATPEYVRKRRRATSKQVDINKLSPGDYVVHKSHGIGKFLKLDALANREYLMIQYA
DGILRVPADSLDSLSRFRHTGTRPPELHKMGGKVWEATKNKVRKAVKKLAVDLLNLYAKRAKQVGYAYPPDSPWQQELED
SFPYQPTPDQLKAVQDVKRDLEGDRPMDRLVCGDVGFGKTEVAVRAIFKAVTSGNKQVALLAPTTVLTQQHYHTLKERFA
PYPITIGLLNRFRTASEKKEILAKLKSGELDIVVGTQQVLGTSVKFKDLGLLVIDEEQRFGVNQKEKIKTLKTEVDVLTL
TATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLSPYNPEVIRTAIRNELDRGGQVFYVVPRIEGIEELGGQLRQMVP
SARIAIGHGQMEESELESTMLAFNDGEADILVCTTIIEAGLDIPRVNTIIVEDAQKFGLAQLYQLRGRVGRSGIQAHAWL
LYPNQKQLTEKARLRLRALQEFSQLGSGYQLATRDMEIRGVGNLLGAEQSGQMEAIGYEFYMEMLQDAIKEIQGQEIPKV
EDTQIDLPLTAFIPSDYIPDLEEKMAAYRRITSIESTDELPKIALDWGDRYGMLPSPVEELFKVVKLKHLAKSLGFSRIK
VEGKQNLVLETPMEEPAWKLLAENLPNHLQSRFVYSAKKVVVRGLGVLAPAKQMDNLIDWFGKMQGALPETKMETLVGK

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA