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The map label for this gene is mjaVIRP

Identifier: 298575367

GI number: 298575367

Start: 1152607

End: 1153287

Strand: Reverse

Name: mjaVIRP

Synonym: NA

Alternate gene names: 298575367

Gene position: 1153287-1152607 (Counterclockwise)

Preceding gene: 298575372

Following gene: 15669392

Centisome position: 69.27

GC content: 26.73

Gene sequence:

>681_bases
ATGTTGCACTTTGGAGGGTTTATTATGGAAATAAACCACATATCTAAGATTTTAGAAAAAGAGAGGGAAGAATACATTAG
AAATAAAGTTGAAGAATATTTAAAACAAGGTTTTTCTAAGGATGATGCGGTAAATAAGGCAAATCAATCATGGAGAACTT
ACATTGGACATAGAATTCAAGATGTTATTTACAATCTACTTAAAAAATTTTTAAAAGATAGCGGATTAAAAGTAACTACT
GACAAAGCTTTAAATAATAGAAATTTACCAGAAGAATTGGATAAAGTTAAAAGATTGATAGCCATAAATTATGGTGAATA
TCTTTTCCTTCCAGATGCAGATGTTATTGTTTATAAAGTTGAAAATAATGATATAAAAATAATAGCAATCATTTCAGTTA
AAAATTCTTTTAGAGAAAGAAGATTTGAAACAACATATTGGAAACTAAAATTGAAAGAGTCCCCAGTAACTTCACATATA
AAGGTATTCTTAGCCACTCCAGATAAAGACAATGAAATTTCTTATAAATGTCCAAATGGAAAACCTAAAAAGATGAGAAT
AATCTTAGAATACGAACTTGATGGAATATATTTCCTAAAAGAGGACTTTGAAGAAACAGAAAAAGCAAAACATTTTGGAA
AAATTGTTGAAGACATTATAGAAATTTCTAAGAAATTATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: R.MjaVIP; Endonuclease MjaVIP; Type II restriction enzyme MjaVIP

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:
NA

Sequences:

>Translated_226_residues
MLHFGGFIMEINHISKILEKEREEYIRNKVEEYLKQGFSKDDAVNKANQSWRTYIGHRIQDVIYNLLKKFLKDSGLKVTT
DKALNNRNLPEELDKVKRLIAINYGEYLFLPDADVIVYKVENNDIKIIAIISVKNSFRERRFETTYWKLKLKESPVTSHI
KVFLATPDKDNEISYKCPNGKPKKMRIILEYELDGIYFLKEDFEETEKAKHFGKIVEDIIEISKKL
>Mature_226_residues
MLHFGGFIMEINHISKILEKEREEYIRNKVEEYLKQGFSKDDAVNKANQSWRTYIGHRIQDVIYNLLKKFLKDSGLKVTT
DKALNNRNLPEELDKVKRLIAINYGEYLFLPDADVIVYKVENNDIKIIAIISVKNSFRERRFETTYWKLKLKESPVTSHI
KVFLATPDKDNEISYKCPNGKPKKMRIILEYELDGIYFLKEDFEETEKAKHFGKIVEDIIEISKKL

Specific function: Recognizes the double-stranded unmethylated sequence CCGG

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0262

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): T2M6_METJA (P81326)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_248204.2
- REBASE:   16564
- GeneID:   1452612
- GenomeReviews:   L77117_GR
- TIGR:   MJ1208.1
- HOGENOM:   HBG707743
- OMA:   RERFTET
- ProtClustDB:   CLSK2792010
- BioCyc:   MJAN243232:MJ_1208.1-MONOMER
- BRENDA:   3.1.21.4

Pfam domain/function: NA

EC number: =3.1.21.4

Molecular weight: Translated: 26711; Mature: 26711

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHFGGFIMEINHISKILEKEREEYIRNKVEEYLKQGFSKDDAVNKANQSWRTYIGHRIQ
CCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
DVIYNLLKKFLKDSGLKVTTDKALNNRNLPEELDKVKRLIAINYGEYLFLPDADVIVYKV
HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHEECCCCEEEECCCCEEEEEE
ENNDIKIIAIISVKNSFRERRFETTYWKLKLKESPVTSHIKVFLATPDKDNEISYKCPNG
ECCCEEEEEEEECHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCCCCCCEEEECCCC
KPKKMRIILEYELDGIYFLKEDFEETEKAKHFGKIVEDIIEISKKL
CCCEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHFGGFIMEINHISKILEKEREEYIRNKVEEYLKQGFSKDDAVNKANQSWRTYIGHRIQ
CCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
DVIYNLLKKFLKDSGLKVTTDKALNNRNLPEELDKVKRLIAINYGEYLFLPDADVIVYKV
HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHEECCCCEEEECCCCEEEEEE
ENNDIKIIAIISVKNSFRERRFETTYWKLKLKESPVTSHIKVFLATPDKDNEISYKCPNG
ECCCEEEEEEEECHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCCCCCCEEEECCCC
KPKKMRIILEYELDGIYFLKEDFEETEKAKHFGKIVEDIIEISKKL
CCCEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087