| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is rps14P
Identifier: 15669881
GI number: 15669881
Start: 415652
End: 415813
Strand: Direct
Name: rps14P
Synonym: MJ0469.1
Alternate gene names: 15669881
Gene position: 415652-415813 (Clockwise)
Preceding gene: 15668646
Following gene: 15668647
Centisome position: 24.96
GC content: 34.57
Gene sequence:
>162_bases ATGGCAAAAAAACCATGGAAAAAGAAATATGGTTATGGAATTAGACCATGCCAAAGATGTGGGCATGTAGGTCCAGGTTT AATCAGAAAGTATGGATTAAATCTCTGCAGACAGTGCTTTAGGGAAATAGCTCACAAGTTAGGATTTAAAAAATTAGATT AA
Upstream 100 bases:
>100_bases AGAGAAGAGGCAATTGAATTTATAGAAAAAACATTTGGAGTTAAAGTTGAAAGAGTCTTGTTAGAGGAGGAAGAAGAAAC ACAATAAAAAGGTGATGTAG
Downstream 100 bases:
>100_bases ACCAAAACACTCTTTACTAAAAATTCTTAATGGAGGGAAAACATGAGTTTAATGGACCCACTAGCAAACGCATTAAACCA TATCTCTAACTGTGAGAGAG
Product: 30S ribosomal protein S14P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MAKKPWKKKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD
Sequences:
>Translated_53_residues MAKKPWKKKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD >Mature_52_residues AKKPWKKKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD
Specific function: Binds 16S rRNA, required for the assembly of 30S particles
COG id: COG0199
COG function: function code J; Ribosomal protein S14
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S14P family. Zinc- binding S14P subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RS14Z_METJA (P54110)
Other databases:
- EMBL: L77117 - ProteinModelPortal: P54110 - SMR: P54110 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0469.1 - NMPDR: fig|243232.1.peg.482 - TIGR: MJ0469.1 - HOGENOM: HBG589144 - OMA: LWYSHPR - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_01364_A - InterPro: IPR001209 - InterPro: IPR018271
Pfam domain/function: PF00253 Ribosomal_S14
EC number: NA
Molecular weight: Translated: 6193; Mature: 6061
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: PS00527 RIBOSOMAL_S14
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKPWKKKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD CCCCCCCHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AKKPWKKKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD CCCCCCHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087