Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669870

Identifier: 15669870

GI number: 15669870

Start: 1656629

End: 1658533

Strand: Reverse

Name: 15669870

Synonym: MJ1674

Alternate gene names: NA

Gene position: 1658533-1656629 (Counterclockwise)

Preceding gene: 15669877

Following gene: 15669869

Centisome position: 99.61

GC content: 27.98

Gene sequence:

>1905_bases
ATGTTGAAAGTCCTCATCTCCCCTTTAGGCGTTGGAGATACAAATACTGATGTTTATAAAAGGCAATATAAAACAGCAGA
GTATAAATTTGAAGGAGATATCGATGGTATTGAAAGCCCATTTGTTTTGTCAGTTTTAATTGAAAAGTTGAAGGTTGATA
AAGTTATTGTTGTTGGAACTGCAAAATCAATGTGGGAAAAATTATATGAATATTATGCCAAGGAAGTTGGAGAATTTGAC
GAAGAATATTGGATTGAAATTGGGAAGAAAGTTGGAATGTCAAAATATGATAACTATGCTCTTTCAGAAGAAGATTTGAA
GAAAATAGAGAAGGTTATTGATAAATATTTGAAAAAAATTAATCCAAATGCTGTTGGAGGTTCTAAATGCAAGATTATAA
AGTATGGAATTGATAAGGATGAGATTTGGGAGAATTTTGATTTATTTATGAGTTTAATAAATGAAGTAAATGATGGAGAT
GAGATTTATTTGGACATAACTCATTCATTTAGGTCTATTCCATTATTTATGTATGTTATGTTGGAGTTTATGAGGTATTT
TAAAAATGTAAAGTTAAAGGGAATCTACTATGGAATGTTAGATGTAATCCGTGAATTGGGACATGCACCAGTTGTTGATT
TAAGCCCGATATTTGAAATATCAGAGTGGATTAGAGGAATGTATGAATTCACCACTTATGGAAACAGTTACTTAATCTCA
AAACTTTTAGAAAATGAAGATAAAGAGATAGCCGAAAAACTACAGAAAATCTCAAGATACATTGATGCTAATTATTTAAA
AGAGTTGAGAGAGGAAGTTAAAACTCTAAAACCACTGTTAAATGAGAAAAAAGATACGGGAAGGTTTTTAAAATATTTCA
TTCCTGAGTTGCATAAATTTATTGATAAATTAAAATATGAAGATTCAGATTTTGAGTTCCAAATATCTATGGCAAAATGG
AACTTTGATAATAAAAAATACAGCTCTGGCTATTTATGTTTAACTGATTCAATATTTTGGAAATTATGTGAGCTTTATAA
TTTACCGTCTGTTTATAAAAATAGGGAGGTTATGAAGGGAATAATATACAATCCATCCTTGAATAAAAAATATTCTGCGT
TTGGGTCTATTAAAGATATGCATTACAAAAGATTAAGGAACATAAGAAACAAAATTGCCCATGCAGATGTTAGTAAAAAG
GGAGATGATTTCAATCCTGAAAATGATTTAGAGGATGTTGTCAATTTACTGAAAAATGTCAATCTACCTGATTTTGATAA
GATAATCGAGGATTTACTATTAGATGTTAAAAATAACCAAAATAATAAAACACTTAAATTGTTAAAAAATATTTTGAATA
TACAAATAATTAGAAAGATTATTAAAGCATATAATTTTGAGAGCAATGAAATATACTGGGATTTTGTTAGTGGTTATCTC
TTAAATAAGAATAATAAATGCAATAATGAAAAATTAAGAGAAATCATCGAGATATTCCACAAAAACATAGAGGATGCTGG
TGAATTGGAGGAAGCATTTAATTTTGTAAAAAATACAGAAGATGAGGAATTGTTGGATAGTTTAGCATTACAAAATGCAA
TCATGCATTATGCCCTCTTCAAACTTTCAAATGCTTATAATATCAAAAATAAGGAAGATAAAGAGGCAATTAAATGGGTT
TTGTTAAATCAAAATCTATGTTCAAAGCATCCAATTTTGAAGGAGATAAATAACAACTACCACAAAATATTCAAAAATAA
GGATAAACCTATGTCTAATGAGATACTTGAAGCATCTAAAAATATAATAAGACTGTTAAACAGTGATTTGTCAGAAATAA
AAGATAGTGTTCCTCTAAATTTGATAATAATCAGATATAGAAGTTATAAAAATAATAGAAGGTGA

Upstream 100 bases:

>100_bases
AAAATTAATTCATATTTGTATATTTTCAAATTTACAAAATAAAAAACTATTTATATGACTTTTTTATTATTTTTAAGGTT
CCACAAATTTTTGAGGTGAA

Downstream 100 bases:

>100_bases
AATCATGCCTAAAATGTTTTTATTATTTTCTCATAAACTTACAGATGACCAAATTAATGATGCAAGGAAAAATCTGAAAG
TTGATGAATTTATTTACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGTAKSMWEKLYEYYAKEVGEFD
EEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKINPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGD
EIYLDITHSFRSIPLFMYVMLEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS
KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKFIDKLKYEDSDFEFQISMAKW
NFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKGIIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKK
GDDFNPENDLEDVVNLLKNVNLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL
LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALFKLSNAYNIKNKEDKEAIKWV
LLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASKNIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR

Sequences:

>Translated_634_residues
MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGTAKSMWEKLYEYYAKEVGEFD
EEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKINPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGD
EIYLDITHSFRSIPLFMYVMLEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS
KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKFIDKLKYEDSDFEFQISMAKW
NFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKGIIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKK
GDDFNPENDLEDVVNLLKNVNLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL
LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALFKLSNAYNIKNKEDKEAIKWV
LLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASKNIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR
>Mature_634_residues
MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGTAKSMWEKLYEYYAKEVGEFD
EEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKINPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGD
EIYLDITHSFRSIPLFMYVMLEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS
KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKFIDKLKYEDSDFEFQISMAKW
NFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKGIIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKK
GDDFNPENDLEDVVNLLKNVNLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL
LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALFKLSNAYNIKNKEDKEAIKWV
LLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASKNIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1674_METJA (Q59068)

Other databases:

- EMBL:   L77117
- PIR:   H64508
- RefSeq:   NP_248684.1
- ProteinModelPortal:   Q59068
- GeneID:   1452583
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1674
- NMPDR:   fig|243232.1.peg.1721
- TIGR:   MJ1674
- OMA:   IFEISEW
- ProtClustDB:   CLSK2517765
- BioCyc:   MJAN243232:MJ_1674-MONOMER
- InterPro:   IPR013383
- InterPro:   IPR011742
- TIGRFAMs:   TIGR02221
- TIGRFAMs:   TIGR02549

Pfam domain/function: PF09530 Cas_TM1812

EC number: NA

Molecular weight: Translated: 74783; Mature: 74783

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGT
CCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
AKSMWEKLYEYYAKEVGEFDEEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGDEIYLDITHSFRSIPLFMYVM
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
LEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS
HHHHHHHHCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKF
HHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IDKLKYEDSDFEFQISMAKWNFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKG
HHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHCCHHHHHH
IIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKKGDDFNPENDLEDVVNLLKNV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
NLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALF
ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KLSNAYNIKNKEDKEAIKWVLLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASK
HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCHHHHHHHHH
NIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGT
CCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
AKSMWEKLYEYYAKEVGEFDEEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGDEIYLDITHSFRSIPLFMYVM
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
LEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS
HHHHHHHHCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKF
HHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IDKLKYEDSDFEFQISMAKWNFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKG
HHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHCCHHHHHH
IIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKKGDDFNPENDLEDVVNLLKNV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
NLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALF
ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KLSNAYNIKNKEDKEAIKWVLLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASK
HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCHHHHHHHHH
NIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087