| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669868
Identifier: 15669868
GI number: 15669868
Start: 1653798
End: 1656200
Strand: Reverse
Name: 15669868
Synonym: MJ1672
Alternate gene names: NA
Gene position: 1656200-1653798 (Counterclockwise)
Preceding gene: 15669869
Following gene: 15669867
Centisome position: 99.47
GC content: 29.21
Gene sequence:
>2403_bases ATGGGAAATTGTAATGAATACACTGCCTTAAAAATTGGGGCTTTATTGCACGATATTGGAAAGTTTATTCAAAGAGCCAG TGATAAACCAAAATCTAAAGGACATGATAAATTTGGTTATGAATTTTTAAAAGAGAAGTTTAAGAATGGATTTTTAAACC ATTTAGATGAAAAAACAAAGGATAAAATATTGGAAATTGTTAAAGAACACCATAACCAAAAAATTAAAGATGATTTAATT GGAATTGTTAGATTGGCTGACTGGCTCAGTAGTGGGGAAAGAAGAGAACCAAAAGGAGACCCAGAAAATGTTGAGGTTTT AAATACTGAAGAACAAAAATTACTTTCAATATTTGAAACAGTGTGTATTGGAGAATTAACTGAAAATCTTTATAAAAATG GATTTAAATACTCTTTAAAACCACTAAATGTCTCTGATGCTATATTTACAGACAAACCATATCCAAATGAAAATTATAAA GAGTTATTTAGTAAATTTGAGGATGAAATTAAGGATTTCAAAGGAGATGTTTCATTTGAAGAACTCTATCAACTAATGCA AAAATATACGTGGTGTATTCCTTCAGTAACGATGTGGAAAAAAGCTGGAAGTTTAAAAGGTGGTTTGCCAGATGTTTCAC TATTTGACCACTCAAAAACAACCTGTGCAATTGCCTGCTGTCTCTATCAGATGTATGTTAAAGAAAACAAGAAGAAAAAC AAATATGCTAAAGAATATATTGATGATAAAACATTAGAAAAACTCTTTAACAACGATAATGGCTGGAATAAAGAAATATT CTCATTAATTCATGGAGATTTGTCTGGAATTCAAGACTTTGTATTCACAATAACAACAAAGTATGCCACAAAGTCATTAA AGGGAAGAAGCTTTTATCTGGACTTTTTAACTGAATACTTTGCAAAATACATTTGTAAAGAATTAAATCTTCCAATTACC AATATTTTATTCTATGGAGGAGGGCATTTCTACATTTTAAGCTATAAAGTTGATGAAAACTTGATAAATAAGTTAGAAAA AGAAATTAATGAAGTACTGTTCAATATGTTTAGAACTAAAATATATATTACAATTGCAGAGGTTGGTGTAACCCCAAATG ACTTTAAAAAATCTGAAGATAAGGAGTCAAAAGAAAAAACATGGGGATTTGCTAAAAAATGGAAAGAAGTTTCTGAAAAG ACAGTTGAAAAGAAACTTAGAAGGTTTGAATATAAATTGGAGGGATTATTTGAGCCATACAATAGGGGGAGTGAAAATAG GTGTGTAATTTGTAGGAATGAGTTTGATAAAAATGAAAAAGGTTATGCAATACGTGAAAATGAAAGTAAATCCGAGAGAA TATGTGACTATTGTGCTTCATTCGTAGCTTTAACTGATATATTAAAAAATTTCCAAATGGAAAAAACAATAAAATTTAAC AAAGCATATCCAATTATTCATTTAACTAAAAATAAGGACAATCTCTCACTTCAAAGAGAAGAATTTAGTTTCTTAACGGT TAAGGCAATAGAAAAATTAGAAAGCAAATTTAGAGTTTTATCTGATGAAAATTATTTCTTAAAAGAATACAAACTCCCTC ACGACTCTGGAGAATTAATAATTCCATACAAAATCTGGGCAATTGCATTCCCTATAATTGAAAATGAAACTGAAAAAAGA ATATTAGATTTTGATGGATTAGCTGAAAAAGCTTTTGAAAGAACTGGAACAAGAAAAATTGGAATACTAAAAATGGACGT TGATAATTTAGGAGAAATATTCACCACTGGTTTGGGAAATGATGCAACAATCTCAAGAATGAGCACATTAAGTTCTATGC TAACTTTATTCTTCACTGGCTATATTCCTCATTTAATTAAAAATGAAGAATTTGAAGTTAATGGGAAAAAATACAAGTTT AAGGATAATATTTACTTAGTATATGCTGGAGGAGATGATACTTTAATTGTTGGAGCATGGGATGCTGTTTGGGAGTTAGC TAAGAGAATTAGAGGGGACTTTAAAAAATTCGTGTGCTATAATCCTTATATAACCCTAAGTGCTGGAATAGTGTTTGTTA ATCCAAAGTTTGAGTTTAAAAAGGCTGTAAATATGGCTGAAGAAGAATTAGAGAATGGTAAAAACTATATCATATACGAA GATGAGGAAACTGAGAAAAAAGTAGATAAAAACGCTTTAACGGTCTTTAATTGTCCAATGAACTGGGATTTAGAAGTTGA ATATAATGAATACTGCTGGACTAAATTAAAGTCATATTTAGAAGGAATTAATAAAGAAATGGTAGAATTAGAAAGTTTAG TTAAAAAATTTAATGAGGATGATTTGGAGAAGAATTTGAAAAAGCAATTGAAGAGACAAATAAGAAAAGAATCCTACATA TAG
Upstream 100 bases:
>100_bases GACGGAAAAATAATTACCATTAGAAAATTTAAACATTGTAGATTTAGAAAATATAATCCATATTAGTGTTGGTTTAGAAA TGTAAAGTTGGGGGATTTAG
Downstream 100 bases:
>100_bases CTCAAATAACTGGAGGGAGGTTAGAGTATGTAATTAAGAAAGATGATGAGATAATTATAAACCTCCCATACTATTGGAGA GTAATTTACTACCTACATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MGNCNEYTALKIGALLHDIGKFIQRASDKPKSKGHDKFGYEFLKEKFKNGFLNHLDEKTKDKILEIVKEHHNQKIKDDLI GIVRLADWLSSGERREPKGDPENVEVLNTEEQKLLSIFETVCIGELTENLYKNGFKYSLKPLNVSDAIFTDKPYPNENYK ELFSKFEDEIKDFKGDVSFEELYQLMQKYTWCIPSVTMWKKAGSLKGGLPDVSLFDHSKTTCAIACCLYQMYVKENKKKN KYAKEYIDDKTLEKLFNNDNGWNKEIFSLIHGDLSGIQDFVFTITTKYATKSLKGRSFYLDFLTEYFAKYICKELNLPIT NILFYGGGHFYILSYKVDENLINKLEKEINEVLFNMFRTKIYITIAEVGVTPNDFKKSEDKESKEKTWGFAKKWKEVSEK TVEKKLRRFEYKLEGLFEPYNRGSENRCVICRNEFDKNEKGYAIRENESKSERICDYCASFVALTDILKNFQMEKTIKFN KAYPIIHLTKNKDNLSLQREEFSFLTVKAIEKLESKFRVLSDENYFLKEYKLPHDSGELIIPYKIWAIAFPIIENETEKR ILDFDGLAEKAFERTGTRKIGILKMDVDNLGEIFTTGLGNDATISRMSTLSSMLTLFFTGYIPHLIKNEEFEVNGKKYKF KDNIYLVYAGGDDTLIVGAWDAVWELAKRIRGDFKKFVCYNPYITLSAGIVFVNPKFEFKKAVNMAEEELENGKNYIIYE DEETEKKVDKNALTVFNCPMNWDLEVEYNEYCWTKLKSYLEGINKEMVELESLVKKFNEDDLEKNLKKQLKRQIRKESYI
Sequences:
>Translated_800_residues MGNCNEYTALKIGALLHDIGKFIQRASDKPKSKGHDKFGYEFLKEKFKNGFLNHLDEKTKDKILEIVKEHHNQKIKDDLI GIVRLADWLSSGERREPKGDPENVEVLNTEEQKLLSIFETVCIGELTENLYKNGFKYSLKPLNVSDAIFTDKPYPNENYK ELFSKFEDEIKDFKGDVSFEELYQLMQKYTWCIPSVTMWKKAGSLKGGLPDVSLFDHSKTTCAIACCLYQMYVKENKKKN KYAKEYIDDKTLEKLFNNDNGWNKEIFSLIHGDLSGIQDFVFTITTKYATKSLKGRSFYLDFLTEYFAKYICKELNLPIT NILFYGGGHFYILSYKVDENLINKLEKEINEVLFNMFRTKIYITIAEVGVTPNDFKKSEDKESKEKTWGFAKKWKEVSEK TVEKKLRRFEYKLEGLFEPYNRGSENRCVICRNEFDKNEKGYAIRENESKSERICDYCASFVALTDILKNFQMEKTIKFN KAYPIIHLTKNKDNLSLQREEFSFLTVKAIEKLESKFRVLSDENYFLKEYKLPHDSGELIIPYKIWAIAFPIIENETEKR ILDFDGLAEKAFERTGTRKIGILKMDVDNLGEIFTTGLGNDATISRMSTLSSMLTLFFTGYIPHLIKNEEFEVNGKKYKF KDNIYLVYAGGDDTLIVGAWDAVWELAKRIRGDFKKFVCYNPYITLSAGIVFVNPKFEFKKAVNMAEEELENGKNYIIYE DEETEKKVDKNALTVFNCPMNWDLEVEYNEYCWTKLKSYLEGINKEMVELESLVKKFNEDDLEKNLKKQLKRQIRKESYI >Mature_799_residues GNCNEYTALKIGALLHDIGKFIQRASDKPKSKGHDKFGYEFLKEKFKNGFLNHLDEKTKDKILEIVKEHHNQKIKDDLIG IVRLADWLSSGERREPKGDPENVEVLNTEEQKLLSIFETVCIGELTENLYKNGFKYSLKPLNVSDAIFTDKPYPNENYKE LFSKFEDEIKDFKGDVSFEELYQLMQKYTWCIPSVTMWKKAGSLKGGLPDVSLFDHSKTTCAIACCLYQMYVKENKKKNK YAKEYIDDKTLEKLFNNDNGWNKEIFSLIHGDLSGIQDFVFTITTKYATKSLKGRSFYLDFLTEYFAKYICKELNLPITN ILFYGGGHFYILSYKVDENLINKLEKEINEVLFNMFRTKIYITIAEVGVTPNDFKKSEDKESKEKTWGFAKKWKEVSEKT VEKKLRRFEYKLEGLFEPYNRGSENRCVICRNEFDKNEKGYAIRENESKSERICDYCASFVALTDILKNFQMEKTIKFNK AYPIIHLTKNKDNLSLQREEFSFLTVKAIEKLESKFRVLSDENYFLKEYKLPHDSGELIIPYKIWAIAFPIIENETEKRI LDFDGLAEKAFERTGTRKIGILKMDVDNLGEIFTTGLGNDATISRMSTLSSMLTLFFTGYIPHLIKNEEFEVNGKKYKFK DNIYLVYAGGDDTLIVGAWDAVWELAKRIRGDFKKFVCYNPYITLSAGIVFVNPKFEFKKAVNMAEEELENGKNYIIYED EETEKKVDKNALTVFNCPMNWDLEVEYNEYCWTKLKSYLEGINKEMVELESLVKKFNEDDLEKNLKKQLKRQIRKESYI
Specific function: Unknown
COG id: COG1353
COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1672_METJA (Q59066)
Other databases:
- EMBL: L77117 - PIR: F64508 - RefSeq: NP_248682.1 - GeneID: 1452581 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1672 - NMPDR: fig|243232.1.peg.1719 - TIGR: MJ1672 - HOGENOM: HBG540946 - OMA: CAIACCL - ProtClustDB: CLSK796970 - BioCyc: MJAN243232:MJ_1672-MONOMER - InterPro: IPR013408 - InterPro: IPR000160 - TIGRFAMs: TIGR02578
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93634; Mature: 93503
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNCNEYTALKIGALLHDIGKFIQRASDKPKSKGHDKFGYEFLKEKFKNGFLNHLDEKTK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DKILEIVKEHHNQKIKDDLIGIVRLADWLSSGERREPKGDPENVEVLNTEEQKLLSIFET HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH VCIGELTENLYKNGFKYSLKPLNVSDAIFTDKPYPNENYKELFSKFEDEIKDFKGDVSFE HHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH ELYQLMQKYTWCIPSVTMWKKAGSLKGGLPDVSLFDHSKTTCAIACCLYQMYVKENKKKN HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHH KYAKEYIDDKTLEKLFNNDNGWNKEIFSLIHGDLSGIQDFVFTITTKYATKSLKGRSFYL HHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH DFLTEYFAKYICKELNLPITNILFYGGGHFYILSYKVDENLINKLEKEINEVLFNMFRTK HHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH IYITIAEVGVTPNDFKKSEDKESKEKTWGFAKKWKEVSEKTVEKKLRRFEYKLEGLFEPY EEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRGSENRCVICRNEFDKNEKGYAIRENESKSERICDYCASFVALTDILKNFQMEKTIKFN CCCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEC KAYPIIHLTKNKDNLSLQREEFSFLTVKAIEKLESKFRVLSDENYFLKEYKLPHDSGELI CCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEE IPYKIWAIAFPIIENETEKRILDFDGLAEKAFERTGTRKIGILKMDVDNLGEIFTTGLGN EEEEHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCC DATISRMSTLSSMLTLFFTGYIPHLIKNEEFEVNGKKYKFKDNIYLVYAGGDDTLIVGAW CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCEEEEEECCCCEEEEECH DAVWELAKRIRGDFKKFVCYNPYITLSAGIVFVNPKFEFKKAVNMAEEELENGKNYIIYE HHHHHHHHHHHHHHHHHEEECCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEC DEETEKKVDKNALTVFNCPMNWDLEVEYNEYCWTKLKSYLEGINKEMVELESLVKKFNED CCHHHHHHCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DLEKNLKKQLKRQIRKESYI HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNCNEYTALKIGALLHDIGKFIQRASDKPKSKGHDKFGYEFLKEKFKNGFLNHLDEKTK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DKILEIVKEHHNQKIKDDLIGIVRLADWLSSGERREPKGDPENVEVLNTEEQKLLSIFET HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH VCIGELTENLYKNGFKYSLKPLNVSDAIFTDKPYPNENYKELFSKFEDEIKDFKGDVSFE HHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH ELYQLMQKYTWCIPSVTMWKKAGSLKGGLPDVSLFDHSKTTCAIACCLYQMYVKENKKKN HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHH KYAKEYIDDKTLEKLFNNDNGWNKEIFSLIHGDLSGIQDFVFTITTKYATKSLKGRSFYL HHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH DFLTEYFAKYICKELNLPITNILFYGGGHFYILSYKVDENLINKLEKEINEVLFNMFRTK HHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH IYITIAEVGVTPNDFKKSEDKESKEKTWGFAKKWKEVSEKTVEKKLRRFEYKLEGLFEPY EEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRGSENRCVICRNEFDKNEKGYAIRENESKSERICDYCASFVALTDILKNFQMEKTIKFN CCCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEC KAYPIIHLTKNKDNLSLQREEFSFLTVKAIEKLESKFRVLSDENYFLKEYKLPHDSGELI CCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEE IPYKIWAIAFPIIENETEKRILDFDGLAEKAFERTGTRKIGILKMDVDNLGEIFTTGLGN EEEEHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCC DATISRMSTLSSMLTLFFTGYIPHLIKNEEFEVNGKKYKFKDNIYLVYAGGDDTLIVGAW CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCEEEEEECCCCEEEEECH DAVWELAKRIRGDFKKFVCYNPYITLSAGIVFVNPKFEFKKAVNMAEEELENGKNYIIYE HHHHHHHHHHHHHHHHHEEECCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEC DEETEKKVDKNALTVFNCPMNWDLEVEYNEYCWTKLKSYLEGINKEMVELESLVKKFNED CCHHHHHHCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DLEKNLKKQLKRQIRKESYI HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087