| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669866
Identifier: 15669866
GI number: 15669866
Start: 1653140
End: 1653541
Strand: Reverse
Name: 15669866
Synonym: MJ1670
Alternate gene names: NA
Gene position: 1653541-1653140 (Counterclockwise)
Preceding gene: 15669867
Following gene: 15669865
Centisome position: 99.31
GC content: 28.36
Gene sequence:
>402_bases ATGTCAAAAATTGGAAAATGCATCTTAAATCCTAATGAAATCAATTTAATACTAAATATTAACAGCCAGAATGCAAATGA GATTATAGACATTGCTGAAAATTTAGCCAAAGAGTTTGAGCAAATTCCTGCTACAAAGATGAGAGACTTTTATGACTACG TTCTAAGAATTGATGAAAAAAATGAAAACTGGTATAAAGAACTGGTTTTATTAAAACCAAAATTAGCCTATAATTACGGA AAAGAGACAAATAGAAGAAAGAAAGAAGCATTGGAAAAATTAGCTGGGACATTTAGTGAGATTATCGACAAAATAGATAA TGATTTGAATAAATTTAAAAACTTCAAGACATTCTTTGAGGCATTGGTTGCTTATCACAAAATCTATGCAAAATCACAAT AA
Upstream 100 bases:
>100_bases AGAAGGTTAAAAAGATGTTTTCTTCAAATGTCAAACTCAGCTTTAATGATTTAAAAGTTTCTGCTAAGATTGTTGAGTTG AAAAAAAGAGGGGTGAAATA
Downstream 100 bases:
>100_bases AATAAAATAAGTTGGGGGGATAAGTTATGGAAAACTTAACATTAAAAGGTAAAGTTATCTTAGAGGGAATTATTGAATTA GAGACAGGGATGCACATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSKIGKCILNPNEINLILNINSQNANEIIDIAENLAKEFEQIPATKMRDFYDYVLRIDEKNENWYKELVLLKPKLAYNYG KETNRRKKEALEKLAGTFSEIIDKIDNDLNKFKNFKTFFEALVAYHKIYAKSQ
Sequences:
>Translated_133_residues MSKIGKCILNPNEINLILNINSQNANEIIDIAENLAKEFEQIPATKMRDFYDYVLRIDEKNENWYKELVLLKPKLAYNYG KETNRRKKEALEKLAGTFSEIIDKIDNDLNKFKNFKTFFEALVAYHKIYAKSQ >Mature_132_residues SKIGKCILNPNEINLILNINSQNANEIIDIAENLAKEFEQIPATKMRDFYDYVLRIDEKNENWYKELVLLKPKLAYNYGK ETNRRKKEALEKLAGTFSEIIDKIDNDLNKFKNFKTFFEALVAYHKIYAKSQ
Specific function: Unknown
COG id: COG1421
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1670_METJA (Q59064)
Other databases:
- EMBL: L77117 - PIR: D64508 - RefSeq: NP_248680.1 - ProteinModelPortal: Q59064 - GeneID: 1452579 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1670 - NMPDR: fig|243232.1.peg.1717 - TIGR: MJ1670 - OMA: NFKTFFE - ProtClustDB: CLSK796969 - BioCyc: MJAN243232:MJ_1670-MONOMER - InterPro: IPR010149 - TIGRFAMs: TIGR01870
Pfam domain/function: PF03750 DUF310
EC number: NA
Molecular weight: Translated: 15670; Mature: 15539
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIGKCILNPNEINLILNINSQNANEIIDIAENLAKEFEQIPATKMRDFYDYVLRIDEK CCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC NENWYKELVLLKPKLAYNYGKETNRRKKEALEKLAGTFSEIIDKIDNDLNKFKNFKTFFE CCHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVAYHKIYAKSQ HHHHHHHHHHCCC >Mature Secondary Structure SKIGKCILNPNEINLILNINSQNANEIIDIAENLAKEFEQIPATKMRDFYDYVLRIDEK CCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC NENWYKELVLLKPKLAYNYGKETNRRKKEALEKLAGTFSEIIDKIDNDLNKFKNFKTFFE CCHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVAYHKIYAKSQ HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087