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The map label for this gene is 15669846

Identifier: 15669846

GI number: 15669846

Start: 1631426

End: 1632580

Strand: Reverse

Name: 15669846

Synonym: MJ1650

Alternate gene names: NA

Gene position: 1632580-1631426 (Counterclockwise)

Preceding gene: 15669847

Following gene: 15669845

Centisome position: 98.05

GC content: 33.77

Gene sequence:

>1155_bases
ATGATAATGGTAAATTTACGGATAATAAATTTTATTGGTGATATTATGAAGATTAGGGGAATTTGCTACAGATGTGGAGC
TGAAGATGAACTTATAGATGGACTCTGCCCAATTTGCTATGCTCAGGAGCATCCATTAATTGAAGTTCCAGATAGAGTTG
AGATAGAAGTTTGTCATATGTGTGGTTCTTACAAAAGAAAAATTTGGCAAACACCAAAAAGTGAAGAAGCATTTGAGATA
TTGAATGAAATTGCTTATTATGCAACAAAAGACGCTATTAAAAAGAAAAGTGTTATGGTTGAAGTAGAGATTTATCCTGA
AGTTACCCAACTTCCTGGAGGGAAGAGAAGTAAGTTAATTATTCCAGTGCATATTGTAGCCAGGGGAAGATTACCGGGAG
AGAAAGAAGACAGAACCTATGAGAAAGATATAGAAGTGCATTTAAGGATGGTTCAGTGTCCAAGATGTTCAAGATTTATG
TCTAACTATTATGAGGCAACCTTACAAGTTAGGGCTATGAATAGATATTTAACTGAAGAGGAGAGAGAGGAGTTGGATAA
CTTTGTTAGAGAAGAGTTGGCTAAAAGATTAAAGAAGGATAGAATGGCATTTATAGCAAAATTCATTCCACAAAAAGAGG
GATTGGATTATCAGCTTGGTTCAGTTGGAGCTGCAAGGAATGTAGCTCAAAGAATTAAAGAGAAATATGGTGGAAAGATT
ACTGAAACTGCTACATTAGTTGGAGTGGATAGAGATAGTGGAAAAGAACTTTATAGAGTTACTGTTTCTGTAAGGGTTCC
TGAATATAAAGTTGGGGATGTCGTTGAGTATAAAGATAAATACTACTTAGTTACTGCGATAACTGAAGATAAGGTTTATA
TGAAATCTATTGATTATAAAAGAGAAAAAATCGGATTAGCTTGGCATATAGCAGAGAAGGAAACAAAAATGGCAAAAAAG
AAGGATGAATTAGACACTGCAACGGTTATAGCTACAACTCCAACCATTATGGTTATGGATGACAAAAGTTATGAGGTTTA
TGAATTTGATAACATTGGAGATGTGAAGATTAAAGAGGGTGATAAAGTTAAGATATTTAAAAAAGAAGGGGTTTCTTATT
TGGTAAATAAAATAGAGGGAAAAGATAAACAATAA

Upstream 100 bases:

>100_bases
ACAATGCCTCAAAGTTATTGAATGTTGATTATTTAGATGAGATTGAGATTATTTATTAAATGTATTTCATGAAAGAATTT
TATTTTATTTTTATACCTAC

Downstream 100 bases:

>100_bases
CTTTGGTGATGATATTGATTAAATTAGAGATAGACAGAAGGGCTTACAATTCAATAAAAAATTTTTCAAGGTTAGTTTAT
ACAAAAGCCATAAAAAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIMVNLRIINFIGDIMKIRGICYRCGAEDELIDGLCPICYAQEHPLIEVPDRVEIEVCHMCGSYKRKIWQTPKSEEAFEI
LNEIAYYATKDAIKKKSVMVEVEIYPEVTQLPGGKRSKLIIPVHIVARGRLPGEKEDRTYEKDIEVHLRMVQCPRCSRFM
SNYYEATLQVRAMNRYLTEEEREELDNFVREELAKRLKKDRMAFIAKFIPQKEGLDYQLGSVGAARNVAQRIKEKYGGKI
TETATLVGVDRDSGKELYRVTVSVRVPEYKVGDVVEYKDKYYLVTAITEDKVYMKSIDYKREKIGLAWHIAEKETKMAKK
KDELDTATVIATTPTIMVMDDKSYEVYEFDNIGDVKIKEGDKVKIFKKEGVSYLVNKIEGKDKQ

Sequences:

>Translated_384_residues
MIMVNLRIINFIGDIMKIRGICYRCGAEDELIDGLCPICYAQEHPLIEVPDRVEIEVCHMCGSYKRKIWQTPKSEEAFEI
LNEIAYYATKDAIKKKSVMVEVEIYPEVTQLPGGKRSKLIIPVHIVARGRLPGEKEDRTYEKDIEVHLRMVQCPRCSRFM
SNYYEATLQVRAMNRYLTEEEREELDNFVREELAKRLKKDRMAFIAKFIPQKEGLDYQLGSVGAARNVAQRIKEKYGGKI
TETATLVGVDRDSGKELYRVTVSVRVPEYKVGDVVEYKDKYYLVTAITEDKVYMKSIDYKREKIGLAWHIAEKETKMAKK
KDELDTATVIATTPTIMVMDDKSYEVYEFDNIGDVKIKEGDKVKIFKKEGVSYLVNKIEGKDKQ
>Mature_384_residues
MIMVNLRIINFIGDIMKIRGICYRCGAEDELIDGLCPICYAQEHPLIEVPDRVEIEVCHMCGSYKRKIWQTPKSEEAFEI
LNEIAYYATKDAIKKKSVMVEVEIYPEVTQLPGGKRSKLIIPVHIVARGRLPGEKEDRTYEKDIEVHLRMVQCPRCSRFM
SNYYEATLQVRAMNRYLTEEEREELDNFVREELAKRLKKDRMAFIAKFIPQKEGLDYQLGSVGAARNVAQRIKEKYGGKI
TETATLVGVDRDSGKELYRVTVSVRVPEYKVGDVVEYKDKYYLVTAITEDKVYMKSIDYKREKIGLAWHIAEKETKMAKK
KDELDTATVIATTPTIMVMDDKSYEVYEFDNIGDVKIKEGDKVKIFKKEGVSYLVNKIEGKDKQ

Specific function: Unknown

COG id: COG1499

COG function: function code J; NMD protein affecting ribosome stability and mRNA decay

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1650_METJA (Q59044)

Other databases:

- EMBL:   L77117
- PIR:   H64505
- RefSeq:   NP_248660.1
- ProteinModelPortal:   Q59044
- GeneID:   1452559
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1650
- NMPDR:   fig|243232.1.peg.1697
- TIGR:   MJ1650
- HOGENOM:   HBG541058
- OMA:   KEGLDYQ
- ProtClustDB:   CLSK865290
- BioCyc:   MJAN243232:MJ_1650-MONOMER
- InterPro:   IPR007064

Pfam domain/function: PF04981 NMD3

EC number: NA

Molecular weight: Translated: 44427; Mature: 44427

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMVNLRIINFIGDIMKIRGICYRCGAEDELIDGLCPICYAQEHPLIEVPDRVEIEVCHM
CEEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHCCCCHHCCCCCCEEECCCCCCCHHHHH
CGSYKRKIWQTPKSEEAFEILNEIAYYATKDAIKKKSVMVEVEIYPEVTQLPGGKRSKLI
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHCCCCCCCEEE
IPVHIVARGRLPGEKEDRTYEKDIEVHLRMVQCPRCSRFMSNYYEATLQVRAMNRYLTEE
EEEEEEEECCCCCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHEEHHHHHCCHH
EREELDNFVREELAKRLKKDRMAFIAKFIPQKEGLDYQLGSVGAARNVAQRIKEKYGGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCE
TETATLVGVDRDSGKELYRVTVSVRVPEYKVGDVVEYKDKYYLVTAITEDKVYMKSIDYK
EEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEECCCEEEEEEEECCCEEEHHCCCH
REKIGLAWHIAEKETKMAKKKDELDTATVIATTPTIMVMDDKSYEVYEFDNIGDVKIKEG
HHHCCEEEEECHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEEECCCCCEEECCC
DKVKIFKKEGVSYLVNKIEGKDKQ
CEEEEEHHCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MIMVNLRIINFIGDIMKIRGICYRCGAEDELIDGLCPICYAQEHPLIEVPDRVEIEVCHM
CEEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHCCCCHHCCCCCCEEECCCCCCCHHHHH
CGSYKRKIWQTPKSEEAFEILNEIAYYATKDAIKKKSVMVEVEIYPEVTQLPGGKRSKLI
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHCCCCCCCEEE
IPVHIVARGRLPGEKEDRTYEKDIEVHLRMVQCPRCSRFMSNYYEATLQVRAMNRYLTEE
EEEEEEEECCCCCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHEEHHHHHCCHH
EREELDNFVREELAKRLKKDRMAFIAKFIPQKEGLDYQLGSVGAARNVAQRIKEKYGGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCE
TETATLVGVDRDSGKELYRVTVSVRVPEYKVGDVVEYKDKYYLVTAITEDKVYMKSIDYK
EEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEECCCEEEEEEEECCCEEEHHCCCH
REKIGLAWHIAEKETKMAKKKDELDTATVIATTPTIMVMDDKSYEVYEFDNIGDVKIKEG
HHHCCEEEEECHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEEECCCCCEEECCC
DKVKIFKKEGVSYLVNKIEGKDKQ
CEEEEEHHCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087