Click here to switch to the map view.

The map label for this gene is 15669838

Identifier: 15669838

GI number: 15669838

Start: 1623026

End: 1623511

Strand: Direct

Name: 15669838

Synonym: MJ1642

Alternate gene names: NA

Gene position: 1623026-1623511 (Clockwise)

Preceding gene: 15669835

Following gene: 15669839

Centisome position: 97.48

GC content: 27.16

Gene sequence:

>486_bases
ATGGAAGAACTTGGGAGAAATGTAGATGTGTCTATTTTTAGAATTTTAAGATTTATGAATTTGAGGAAATATATTGGTAT
TGACAATGAAATGTTAATGTATTATTTTGGTAAAGAACTTAGTAAAAATCTGAATTTTAAGAATTTTAAAGAATTAAGTA
ACTTCTATAAAGAGTATAAACTTGGAAGAATTGAAATGGTTAGTGAAAATCCTATAAAGATTAGAATATATGATTGTATA
AGCTGTTCTGGATTGCCAGATGTTGGAAAGCCCTTATGTCATTTTGAGGCAGGGTTTTTGGCAGGTTACATAGAAAATGT
ATTTAATAAAAAGTGTTACATAATAGAAACTCATTGCTGGGGATTGGGAAATAAATTCTGCCAATTTGAAGTTAGATTAG
TTGATAATAAAAAAAGTGAAAATTGTTTTGCATCATCTGGTGATTGTAATGGTTACTTTGGAAAAAATAGAACTAAAAAA
CTTTAA

Upstream 100 bases:

>100_bases
TATCGGCGACGATAAGTAGCAGGGTGTTCCGTGTTGGAACCTCCACCCTTTAGGTGGAGAGAAGATCAGTTAAAATTCCT
AAATACTCCCGTAGTGGAGA

Downstream 100 bases:

>100_bases
ATCATTTAAAAAATTATCTTTAGATATTCCAAAGGGATTTACAGCCATAGTTGGGCCTAATGGTAGTGGAAAATCTAACA
TAGTCGATGCTATATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MEELGRNVDVSIFRILRFMNLRKYIGIDNEMLMYYFGKELSKNLNFKNFKELSNFYKEYKLGRIEMVSENPIKIRIYDCI
SCSGLPDVGKPLCHFEAGFLAGYIENVFNKKCYIIETHCWGLGNKFCQFEVRLVDNKKSENCFASSGDCNGYFGKNRTKK
L

Sequences:

>Translated_161_residues
MEELGRNVDVSIFRILRFMNLRKYIGIDNEMLMYYFGKELSKNLNFKNFKELSNFYKEYKLGRIEMVSENPIKIRIYDCI
SCSGLPDVGKPLCHFEAGFLAGYIENVFNKKCYIIETHCWGLGNKFCQFEVRLVDNKKSENCFASSGDCNGYFGKNRTKK
L
>Mature_161_residues
MEELGRNVDVSIFRILRFMNLRKYIGIDNEMLMYYFGKELSKNLNFKNFKELSNFYKEYKLGRIEMVSENPIKIRIYDCI
SCSGLPDVGKPLCHFEAGFLAGYIENVFNKKCYIIETHCWGLGNKFCQFEVRLVDNKKSENCFASSGDCNGYFGKNRTKK
L

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1642_METJA (Q59036)

Other databases:

- EMBL:   L77117
- PIR:   H64504
- RefSeq:   NP_248652.1
- ProteinModelPortal:   Q59036
- SMR:   Q59036
- GeneID:   1452551
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1642
- NMPDR:   fig|243232.1.peg.1689
- TIGR:   MJ1642
- HOGENOM:   HBG541171
- OMA:   ETHCAGL
- ProtClustDB:   CLSK796299
- BioCyc:   MJAN243232:MJ_1642-MONOMER
- InterPro:   IPR019642
- InterPro:   IPR004096

Pfam domain/function: PF10702 DUF2507; PF02830 V4R

EC number: NA

Molecular weight: Translated: 18847; Mature: 18847

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELGRNVDVSIFRILRFMNLRKYIGIDNEMLMYYFGKELSKNLNFKNFKELSNFYKEYK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
LGRIEMVSENPIKIRIYDCISCSGLPDVGKPLCHFEAGFLAGYIENVFNKKCYIIETHCW
CCEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GLGNKFCQFEVRLVDNKKSENCFASSGDCNGYFGKNRTKKL
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEELGRNVDVSIFRILRFMNLRKYIGIDNEMLMYYFGKELSKNLNFKNFKELSNFYKEYK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
LGRIEMVSENPIKIRIYDCISCSGLPDVGKPLCHFEAGFLAGYIENVFNKKCYIIETHCW
CCEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GLGNKFCQFEVRLVDNKKSENCFASSGDCNGYFGKNRTKKL
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087