| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669834
Identifier: 15669834
GI number: 15669834
Start: 1619669
End: 1620451
Strand: Reverse
Name: 15669834
Synonym: MJ1638
Alternate gene names: NA
Gene position: 1620451-1619669 (Counterclockwise)
Preceding gene: 15669836
Following gene: 15669830
Centisome position: 97.33
GC content: 29.63
Gene sequence:
>783_bases ATGAATTTTGAAAAAATTATAGAGGAAAAAGTAAATCAAAAACTCAAAGAATTGAGGCTAAAAAACTCCTTAGAAATTTT AGAGAAATTAGATATTAATACAGAGCTTAAAGAAGCTTTAAAATCCACGCTTTTAAAGAGATTAAATGGAGAGAAAGAGT TTTATAAAATTTCCATTGATAAAAAGCCAAAGGCAGTTGTTGCATTTAGTGGAGGAGTTGATAGCTCTACATCTGCAATA ATAGCAAAGCAGATTTTTGATGTTAAGGCAGTTTCTTGCTATTCAAAATATATAATGACAGATGAGATGAGAGAAAATGC CAAAAACATAGCTAAGAAGATTGGAATAAGTTTAGAATTTGTGAGTATTGATTTAGAGGAAGTTTATAAAGGAGTTGTTA ATGGTAAATTTCATCCCTGCGGTAGATGCCATAAAGTTATCGAAAATGCAGTTATAGATTATGCCAAAAAAATAGATGCT GAGTTTGTTATATTTGGTGATTTATTAGCTTTTGGATATTTAGCTTTATATAGGGAGGATGAGATTTTTAGATTTAATCT ACCTTCTTTTTTTGCCCTAACAAAGGATGAAGAGAGGGAGATATTAAAAAACAATGGCATTGAGCTAAAAATGAGTTATG GCTGCCCATTGTTAAAAATTTACCATAAACATAATAAGGGATATAAATTTACAATTCAAAGGATTTTGAGGGAAGTTAGG GGAAGGGTAGTTAATGAAGAAGAAGGATTCAAAAATATAGTTGAGATTTTAAATCAGCAATAA
Upstream 100 bases:
>100_bases ATAGTCATTAGTATTATATATTGACATATTAGTATAATCAAAAAAGAAGAAATATATTAAACTTACGTAATTACATATAA CAATTTTTGAGGGTTAAGTT
Downstream 100 bases:
>100_bases AAAACCCTTCCAGGGAATATATAAGATGTTACCTTCAACTTTTAACTCATCACCGATAATTATGCCCTTAGAAGCTTTAA CCCTCTCCATACTCTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MNFEKIIEEKVNQKLKELRLKNSLEILEKLDINTELKEALKSTLLKRLNGEKEFYKISIDKKPKAVVAFSGGVDSSTSAI IAKQIFDVKAVSCYSKYIMTDEMRENAKNIAKKIGISLEFVSIDLEEVYKGVVNGKFHPCGRCHKVIENAVIDYAKKIDA EFVIFGDLLAFGYLALYREDEIFRFNLPSFFALTKDEEREILKNNGIELKMSYGCPLLKIYHKHNKGYKFTIQRILREVR GRVVNEEEGFKNIVEILNQQ
Sequences:
>Translated_260_residues MNFEKIIEEKVNQKLKELRLKNSLEILEKLDINTELKEALKSTLLKRLNGEKEFYKISIDKKPKAVVAFSGGVDSSTSAI IAKQIFDVKAVSCYSKYIMTDEMRENAKNIAKKIGISLEFVSIDLEEVYKGVVNGKFHPCGRCHKVIENAVIDYAKKIDA EFVIFGDLLAFGYLALYREDEIFRFNLPSFFALTKDEEREILKNNGIELKMSYGCPLLKIYHKHNKGYKFTIQRILREVR GRVVNEEEGFKNIVEILNQQ >Mature_260_residues MNFEKIIEEKVNQKLKELRLKNSLEILEKLDINTELKEALKSTLLKRLNGEKEFYKISIDKKPKAVVAFSGGVDSSTSAI IAKQIFDVKAVSCYSKYIMTDEMRENAKNIAKKIGISLEFVSIDLEEVYKGVVNGKFHPCGRCHKVIENAVIDYAKKIDA EFVIFGDLLAFGYLALYREDEIFRFNLPSFFALTKDEEREILKNNGIELKMSYGCPLLKIYHKHNKGYKFTIQRILREVR GRVVNEEEGFKNIVEILNQQ
Specific function: Unknown
COG id: COG1365
COG function: function code R; Predicted ATPase (PP-loop superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1638_METJA (Q59032)
Other databases:
- EMBL: L77117 - PIR: D64504 - RefSeq: NP_248648.1 - ProteinModelPortal: Q59032 - GeneID: 1452547 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1638 - NMPDR: fig|243232.1.peg.1685 - TIGR: MJ1638 - HOGENOM: HBG541113 - OMA: HPCGRCH - ProtClustDB: CLSK876652 - BioCyc: MJAN243232:MJ_1638-MONOMER - InterPro: IPR012096 - InterPro: IPR018317 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PIRSF: PIRSF006601
Pfam domain/function: PF06508 ExsB
EC number: NA
Molecular weight: Translated: 30016; Mature: 30016
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEKIIEEKVNQKLKELRLKNSLEILEKLDINTELKEALKSTLLKRLNGEKEFYKISID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC KKPKAVVAFSGGVDSSTSAIIAKQIFDVKAVSCYSKYIMTDEMRENAKNIAKKIGISLEF CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VSIDLEEVYKGVVNGKFHPCGRCHKVIENAVIDYAKKIDAEFVIFGDLLAFGYLALYRED EEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCC EIFRFNLPSFFALTKDEEREILKNNGIELKMSYGCPLLKIYHKHNKGYKFTIQRILREVR CEEEECCCHHEEECCHHHHHHHHCCCCEEEEECCCCEEHHHHHCCCCHHHHHHHHHHHHH GRVVNEEEGFKNIVEILNQQ CCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNFEKIIEEKVNQKLKELRLKNSLEILEKLDINTELKEALKSTLLKRLNGEKEFYKISID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC KKPKAVVAFSGGVDSSTSAIIAKQIFDVKAVSCYSKYIMTDEMRENAKNIAKKIGISLEF CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VSIDLEEVYKGVVNGKFHPCGRCHKVIENAVIDYAKKIDAEFVIFGDLLAFGYLALYRED EEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCC EIFRFNLPSFFALTKDEEREILKNNGIELKMSYGCPLLKIYHKHNKGYKFTIQRILREVR CEEEECCCHHEEECCHHHHHHHHCCCCEEEEECCCCEEHHHHHCCCCHHHHHHHHHHHHH GRVVNEEEGFKNIVEILNQQ CCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087