| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669806
Identifier: 15669806
GI number: 15669806
Start: 1584520
End: 1586367
Strand: Direct
Name: 15669806
Synonym: MJ1610
Alternate gene names: NA
Gene position: 1584520-1586367 (Clockwise)
Preceding gene: 15669805
Following gene: 15669807
Centisome position: 95.17
GC content: 32.41
Gene sequence:
>1848_bases GTGATTTATATGGGTGGAATCGTTGGAAACAATAGTTTATTAGCCAAAATTGGAGATTATGGGGAAATTGAATACCTTTT TTATCCCCAAGTTGGTTATGAAACTCATTTCTTTGACTCTGCATTGGCAGTTTATGATAAAAAAGTAAAGTGGCATTGGG ATGATGATTGGGATATAACCCAAAAATACATTGAGGAAACGAACATATTTAAAACTATCTTAGAAGATGATAAGATTATA TTAACCATTAAAGATTTTGTGCCAGTATCTCACAACGTGCTTATAAGAAGAGTGTATATAAAAAATAAACTCGATAAAAA ATTAAATTTTAAGCTCTTTTTTTACGAAAATTTGAGAATTGGTGAAAACCCAATAACAAATACAGTTAAATTCTTAGAAG ATGGTTGTATCGTTAAATATAATGGAAAATATATTTTTTGCATTGGAAGTGATAAAAGAATAGATTCATTTCAGTGTGGA AATAGATACAGTAAAACAAGTGCTTACATAGACATAGAAAATGGGATATTGAAGGAGCATAAAGAGAGTTCTGGATTATT AACCGATAGTGCAATATCATGGAATATAAAGATTGATGAAAAAAGAAGTTTGGCATTCAACATCTACATACTTCCACAAA GATTCGATGGAGATTTTTCAATAATAACTGAACAACTAAAGATTATAATGAATAACAGTGAAAACATTAAAAATCTCTCA ATGAATTATTGGAAACATATTATAGGGGAGATAAATAGATTTATACATCCTGAGCTTAGGCAAAATAATAAGATTTATTC TATAACTAAAAGGGCTTTAATGACACTTTTAATGTTATGTGATAAGGAAGGAGGGATTATAGCGGCTCCATCTCTACATC CAGATTATAGATACGTGTGGGGAAGAGATGGAAGTTATATCTCAATTGCTTTGGACTTATTTGGCATAAGGAACATTCCA GACAGATTTTTTGAATTCATGTCTAAGATACAAAATGCAGACGGTTCATGGCTACAAAATTATTATGTTAATGGAAAACC ACGATTAACTGCAATACAGACTGACCAAATTGGTTCCATATTATGGGCAATGGATGTGCATTACAGATTAACTGGGGATA GAAAGTTCGTTGAGAGATACTGGAACACTATAGAGAAAGCTGCTAATTATTTAAGGTTGGTAGCTTTAAACTTTACTCCA TGCTTCGATTTGTGGGAAGAGAGGTTTGGAGTATTTGCTTATACAATGGGAGCTACTTACGCTGGATTGAAATGTGCATA CAGCATGAGTAAGGCAGTGAATAAAAGGGATAAAGTTAAGGATTGGGGAAAAACCATAGAATTTTTAAAACATGAGGTTC CAAAGAGATTTTATTTGGAAGATGAGGAAAGATTTGCTAAATCAATAAATCCTTTAGACAAGACGATAGACACAAGCATA TTGGGTTTAAGTTACCCTTTCAATTTGATTGATGTTGATGATGAGAGAATGATAAAAACAGCCGAAGCAATTGAAAAAGC TTTCAAATATAAGGTTGGAGGGATTGGGAGATATCCAGAAGACATTTACTTTGGAGGCAATCCATGGATTATAACCACAT TATGGCTTTCTTTGTATTATAGAAGGTTATACAAGGTTTTAAAAGAAAAAGATGATAATGGGGCAGATATTTATCTACAA AAATCTAAGAAGTTGTTTAATTGGGTGATGAAATACAGCTTTGATGGGCTGTTTCCAGAGCAAATTCATAAAGAATTAGG TGTGCCAATGTCCGCTATGCCTTTAGGCTGGAGCAATGCAATGTTCCTCATTTATGTGTATGAGAATGATAAGGTCATAA TACCATAA
Upstream 100 bases:
>100_bases TCCTGTACCAATAGGGCGAAGCCCTATGGCTGTGAAGGCTATAAAAAGAATATTGTAGGTTTTTCGCAAAAGGCAATAGA ATATTAAAAAAATATATCGT
Downstream 100 bases:
>100_bases ATAAATTTTTGAGATGAGAGTATGTTAATAACGTTTAATTTTGAGGTGCATCAACCACATAGGCTAAATAAGGAGATAAA CCAAAACGGAAATACTTTAT
Product: glucoamylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDITQKYIEETNIFKTILEDDKII LTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRIGENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCG NRYSKTSAYIDIENGILKEHKESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVWGRDGSYISIALDLFGIRNIP DRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSILWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTP CFDLWEERFGVFAYTMGATYAGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYYRRLYKVLKEKDDNGADIYLQ KSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNAMFLIYVYENDKVIIP
Sequences:
>Translated_615_residues MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDITQKYIEETNIFKTILEDDKII LTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRIGENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCG NRYSKTSAYIDIENGILKEHKESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVWGRDGSYISIALDLFGIRNIP DRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSILWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTP CFDLWEERFGVFAYTMGATYAGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYYRRLYKVLKEKDDNGADIYLQ KSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNAMFLIYVYENDKVIIP >Mature_615_residues MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDITQKYIEETNIFKTILEDDKII LTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRIGENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCG NRYSKTSAYIDIENGILKEHKESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVWGRDGSYISIALDLFGIRNIP DRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSILWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTP CFDLWEERFGVFAYTMGATYAGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYYRRLYKVLKEKDDNGADIYLQ KSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNAMFLIYVYENDKVIIP
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1610_METJA (Q59005)
Other databases:
- EMBL: L77117 - PIR: A64501 - RefSeq: NP_248620.1 - ProteinModelPortal: Q59005 - SMR: Q59005 - GeneID: 1452519 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1610 - NMPDR: fig|243232.1.peg.1657 - TIGR: MJ1610 - HOGENOM: HBG539006 - OMA: IKRYEND - ProtClustDB: CLSK876642 - BioCyc: MJAN243232:MJ_1610-MONOMER - InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006465 - InterPro: IPR000165 - InterPro: IPR011613 - Gene3D: G3DSA:1.50.10.10 - TIGRFAMs: TIGR01577
Pfam domain/function: PF00723 Glyco_hydro_15; SSF48208 Glyco_trans_6hp
EC number: NA
Molecular weight: Translated: 72009; Mature: 72009
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS00820 GLUCOAMYLASE
Important sites: ACT_SITE 403-403 ACT_SITE 406-406
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDIT CEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCHHHH QKYIEETNIFKTILEDDKIILTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRI HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCEEEEEEEECCCC GENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCGNRYSKTSAYIDIENGILKEH CCCCCHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHC KESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS CCCCCCEECCEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHEECCCCCCHHHH MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVW HHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEE GRDGSYISIALDLFGIRNIPDRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSI CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEHHEEECCCCEEEEEECCCCCCE LWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTPCFDLWEERFGVFAYTMGATY EEEEEEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCEEEEECCCHH AGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCE LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYY EEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEHHHHHHHHHH RRLYKVLKEKDDNGADIYLQKSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNA HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCCC MFLIYVYENDKVIIP EEEEEEEECCEEECC >Mature Secondary Structure MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDIT CEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCHHHH QKYIEETNIFKTILEDDKIILTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRI HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCEEEEEEEECCCC GENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCGNRYSKTSAYIDIENGILKEH CCCCCHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHC KESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS CCCCCCEECCEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHEECCCCCCHHHH MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVW HHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEE GRDGSYISIALDLFGIRNIPDRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSI CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEHHEEECCCCEEEEEECCCCCCE LWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTPCFDLWEERFGVFAYTMGATY EEEEEEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCEEEEECCCHH AGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCE LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYY EEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEHHHHHHHHHH RRLYKVLKEKDDNGADIYLQKSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNA HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCCC MFLIYVYENDKVIIP EEEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087