Click here to switch to the map view.

The map label for this gene is glgA

Identifier: 15669802

GI number: 15669802

Start: 1579974

End: 1581539

Strand: Reverse

Name: glgA

Synonym: MJ1606

Alternate gene names: 15669802

Gene position: 1581539-1579974 (Counterclockwise)

Preceding gene: 15669809

Following gene: 15669801

Centisome position: 94.99

GC content: 33.65

Gene sequence:

>1566_bases
ATGAAAATAGTCATCCTTGCTCCAACAATAACCCCTATTGTCTCTTATGGAGGATTAGGGGATGTAATGAGAGACTTGCC
AAAATTTTTAAAAAAAGGTAATGAAGTAGTTGTTCTAACTCTAAACCATTATAATAGGTATTTTACTCTTCCCTATGAAG
ATATCAAAAAAATAACTGTTATCTATAAAGGAGCTAAAATTACATTTGATGTTTTAAGAACAAAGCATCCAACGACAGGA
GTAGATTTAATTGTATTTAGTAATGAAAGTGTCAATAACTTAAATGTTTGGGACCCTATTAAGTATGAAATTTTTGCTGA
TTTGGTTATTACATATTTAGATGAGGTTAAAGATATTGATGTAGTGTCTGGGCATGATTGGATGTGTGGTTTAGCTATAG
CCAAATGCAACGATATTTTAGATTTACCAACAACCTTAACCATACATAATGAGGCATTTAAAGGAGAGATGATTGAGTAT
AAAGGGGAAGTTATGACATTTTTGGAGTTAGGAATTAAGTATGCAGATGCCGTTAATACAGTAAGCCCTTCTCATGCTGA
GGAAATAAAAAACTACCCTTATATAAAAAAATACTTAAATAATAAGCCATTCTGTGGGATTTTAAATGGAATTGATATTG
ATGAATACGACCCCATGAAGATAATAGAAAGGATGTGCAACCTCTCAAACAACAAACTTGACCCAAGAAATTATGCTTAT
ATCTCTCCCTATTCAGCTGAAGATTCCCATAATATAAAACCAAAAATAAAATATTCATGGTTTTATAGAGGAGGAGTTTA
TGAATATGTGGAAGATTGGAATAAGATTGATAAAGGAATATCAGCTACTGATGTTGAGGTCCATGGTGGGGTAGATGGAG
ATATAGAAACTCCATTAATTGGTTTTGTTGGAAGGGCGACACATCAAAAAGGTTTTAACACCATGTTTGAAGCAATTCCA
GAACTTTTAGAAAAACATGATATAAGATTTGTATTTTTAACAAAGGGGGATAGAGATATTGAAGAGAGACTAAAAAATCT
TGCAAATGAACATGATGGAAGAATCTTGGCATTGATAGGCTATTCCCTCCCACTCTCATCTTTAGTATTTGCTGGGAGTG
ATTGGATAATTATGCCTTCATACTGGGAACCGTGTGGTTTAGTGCAAATGGAAGCTATGGCATACTGCACTCCAGTCATA
GCTACAGAAACTGGAGGTTTAAAAGATACCATAATTCCTCTTCATCCAAATCCTTATGAACATCCAAATTTTGATAAGGC
AACGGGTGTTTTATTTAAAGTTCCAGATAAAGTGGGGTTTATGTGGGGGGTTGAGCACGCATTAAATTGGACATTCTATA
AACTTAATGAAATATGTATGTTTATGCAGTATATAAGATATAAATGCCCTAAACATCCTTATGATGAGAACTCCCCATTA
TCTATGATGATGAAAAACTGCTACTATCACGTGTTTAGAAACTTAAGCTGGCAGAACTCCCCATCTATAAGAAAGTATAA
GGGCTTATTTGGAGGAGCAATTTATAATCACTATCTACAACCATAA

Upstream 100 bases:

>100_bases
ACTTTAAATTAGATAATATAAAAACATTGTGATATATGTACATCATAATATAATATTTATTGTTAAAATCTGAAATTGAA
ATTGCTTTAAAGGGGTAATT

Downstream 100 bases:

>100_bases
CTTTCCACTTTATGTAATAAAAGATTTGGGGGGAAATATGCTAAGTTATGATTACGAAAACGCTTTAAAAGTTGGAGAAA
TAAGCCTTGAAGATATCAAT

Product: glycogen synthase GlgA

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MKIVILAPTITPIVSYGGLGDVMRDLPKFLKKGNEVVVLTLNHYNRYFTLPYEDIKKITVIYKGAKITFDVLRTKHPTTG
VDLIVFSNESVNNLNVWDPIKYEIFADLVITYLDEVKDIDVVSGHDWMCGLAIAKCNDILDLPTTLTIHNEAFKGEMIEY
KGEVMTFLELGIKYADAVNTVSPSHAEEIKNYPYIKKYLNNKPFCGILNGIDIDEYDPMKIIERMCNLSNNKLDPRNYAY
ISPYSAEDSHNIKPKIKYSWFYRGGVYEYVEDWNKIDKGISATDVEVHGGVDGDIETPLIGFVGRATHQKGFNTMFEAIP
ELLEKHDIRFVFLTKGDRDIEERLKNLANEHDGRILALIGYSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVI
ATETGGLKDTIIPLHPNPYEHPNFDKATGVLFKVPDKVGFMWGVEHALNWTFYKLNEICMFMQYIRYKCPKHPYDENSPL
SMMMKNCYYHVFRNLSWQNSPSIRKYKGLFGGAIYNHYLQP

Sequences:

>Translated_521_residues
MKIVILAPTITPIVSYGGLGDVMRDLPKFLKKGNEVVVLTLNHYNRYFTLPYEDIKKITVIYKGAKITFDVLRTKHPTTG
VDLIVFSNESVNNLNVWDPIKYEIFADLVITYLDEVKDIDVVSGHDWMCGLAIAKCNDILDLPTTLTIHNEAFKGEMIEY
KGEVMTFLELGIKYADAVNTVSPSHAEEIKNYPYIKKYLNNKPFCGILNGIDIDEYDPMKIIERMCNLSNNKLDPRNYAY
ISPYSAEDSHNIKPKIKYSWFYRGGVYEYVEDWNKIDKGISATDVEVHGGVDGDIETPLIGFVGRATHQKGFNTMFEAIP
ELLEKHDIRFVFLTKGDRDIEERLKNLANEHDGRILALIGYSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVI
ATETGGLKDTIIPLHPNPYEHPNFDKATGVLFKVPDKVGFMWGVEHALNWTFYKLNEICMFMQYIRYKCPKHPYDENSPL
SMMMKNCYYHVFRNLSWQNSPSIRKYKGLFGGAIYNHYLQP
>Mature_521_residues
MKIVILAPTITPIVSYGGLGDVMRDLPKFLKKGNEVVVLTLNHYNRYFTLPYEDIKKITVIYKGAKITFDVLRTKHPTTG
VDLIVFSNESVNNLNVWDPIKYEIFADLVITYLDEVKDIDVVSGHDWMCGLAIAKCNDILDLPTTLTIHNEAFKGEMIEY
KGEVMTFLELGIKYADAVNTVSPSHAEEIKNYPYIKKYLNNKPFCGILNGIDIDEYDPMKIIERMCNLSNNKLDPRNYAY
ISPYSAEDSHNIKPKIKYSWFYRGGVYEYVEDWNKIDKGISATDVEVHGGVDGDIETPLIGFVGRATHQKGFNTMFEAIP
ELLEKHDIRFVFLTKGDRDIEERLKNLANEHDGRILALIGYSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVI
ATETGGLKDTIIPLHPNPYEHPNFDKATGVLFKVPDKVGFMWGVEHALNWTFYKLNEICMFMQYIRYKCPKHPYDENSPL
SMMMKNCYYHVFRNLSWQNSPSIRKYKGLFGGAIYNHYLQP

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=458, Percent_Identity=23.7991266375546, Blast_Score=117, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_METJA (Q59001)

Other databases:

- EMBL:   L77117
- PIR:   E64500
- RefSeq:   NP_248616.1
- ProteinModelPortal:   Q59001
- GeneID:   1452515
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1606
- NMPDR:   fig|243232.1.peg.1653
- TIGR:   MJ1606
- HOGENOM:   HBG541206
- OMA:   RDLPKFL
- ProtClustDB:   CLSK876640
- BioCyc:   MJAN243232:MJ_1606-MONOMER
- BRENDA:   2.4.1.21
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 59737; Mature: 59737

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVILAPTITPIVSYGGLGDVMRDLPKFLKKGNEVVVLTLNHYNRYFTLPYEDIKKITV
CEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEECCHHHHCEEEE
IYKGAKITFDVLRTKHPTTGVDLIVFSNESVNNLNVWDPIKYEIFADLVITYLDEVKDID
EEECCEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE
VVSGHDWMCGLAIAKCNDILDLPTTLTIHNEAFKGEMIEYKGEVMTFLELGIKYADAVNT
EECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
VSPSHAEEIKNYPYIKKYLNNKPFCGILNGIDIDEYDPMKIIERMCNLSNNKLDPRNYAY
CCCHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEE
ISPYSAEDSHNIKPKIKYSWFYRGGVYEYVEDWNKIDKGISATDVEVHGGVDGDIETPLI
ECCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHH
GFVGRATHQKGFNTMFEAIPELLEKHDIRFVFLTKGDRDIEERLKNLANEHDGRILALIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEE
YSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVIATETGGLKDTIIPLHPNPYE
CCCCHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEECCCCCCC
HPNFDKATGVLFKVPDKVGFMWGVEHALNWTFYKLNEICMFMQYIRYKCPKHPYDENSPL
CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHH
SMMMKNCYYHVFRNLSWQNSPSIRKYKGLFGGAIYNHYLQP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIVILAPTITPIVSYGGLGDVMRDLPKFLKKGNEVVVLTLNHYNRYFTLPYEDIKKITV
CEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCEEECCHHHHCEEEE
IYKGAKITFDVLRTKHPTTGVDLIVFSNESVNNLNVWDPIKYEIFADLVITYLDEVKDID
EEECCEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE
VVSGHDWMCGLAIAKCNDILDLPTTLTIHNEAFKGEMIEYKGEVMTFLELGIKYADAVNT
EECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
VSPSHAEEIKNYPYIKKYLNNKPFCGILNGIDIDEYDPMKIIERMCNLSNNKLDPRNYAY
CCCHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEE
ISPYSAEDSHNIKPKIKYSWFYRGGVYEYVEDWNKIDKGISATDVEVHGGVDGDIETPLI
ECCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHH
GFVGRATHQKGFNTMFEAIPELLEKHDIRFVFLTKGDRDIEERLKNLANEHDGRILALIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEE
YSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVIATETGGLKDTIIPLHPNPYE
CCCCHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEECCCCCCC
HPNFDKATGVLFKVPDKVGFMWGVEHALNWTFYKLNEICMFMQYIRYKCPKHPYDENSPL
CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHH
SMMMKNCYYHVFRNLSWQNSPSIRKYKGLFGGAIYNHYLQP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087