Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669776

Identifier: 15669776

GI number: 15669776

Start: 1555118

End: 1555492

Strand: Reverse

Name: 15669776

Synonym: MJ1580

Alternate gene names: NA

Gene position: 1555492-1555118 (Counterclockwise)

Preceding gene: 15669780

Following gene: 15669775

Centisome position: 93.42

GC content: 31.73

Gene sequence:

>375_bases
ATGCTTATAAAAATTTTGGAGGAAAAACTTATGGAACTAATCCAAATAGTTGGGGTTATATTTGCATTGTTTGCCTTGTC
AAGGGTTGTGTTGCAGTTAAAAAGAAGAAGTATAAGCTTTAATGAGGGATTATTTTGGATTTTTGTCTGGGGTTTCGTTG
TAATATTTTTAGTATTCCCAGAGTTTTTTGGATATGTTGCAGAAGTTTTGGGGGTTGGTAGGGGAGTTGATGCACTTATA
TATATATCGATAGTTGTCTTATTCTATTTAATTTATAGGTTGTATGCCAAAATAAACAACTTAGAAAGGCAGATAACACA
TATAGTTAGAGAAATAGCTATAAGGGATAGATATGAACCAAAGAAAAGAGATTGA

Upstream 100 bases:

>100_bases
ACAGAAATAAAATTTTATGATTGAATAAAGATGCCTTTGGCATCAAAATTCCTTATATGGTATAAAAAGCTGTAAAGTCC
TTTGTCAATAGGGTTTTCCC

Downstream 100 bases:

>100_bases
ATTGTTGATGTTTGATGTTTTGCCTTATATGGCAAATATGGAGTTTATTAAAGAGCTTTTAGAAAGTGTTAATAGCTTAG
AAGAGCTTGAACAGAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLIKILEEKLMELIQIVGVIFALFALSRVVLQLKRRSISFNEGLFWIFVWGFVVIFLVFPEFFGYVAEVLGVGRGVDALI
YISIVVLFYLIYRLYAKINNLERQITHIVREIAIRDRYEPKKRD

Sequences:

>Translated_124_residues
MLIKILEEKLMELIQIVGVIFALFALSRVVLQLKRRSISFNEGLFWIFVWGFVVIFLVFPEFFGYVAEVLGVGRGVDALI
YISIVVLFYLIYRLYAKINNLERQITHIVREIAIRDRYEPKKRD
>Mature_124_residues
MLIKILEEKLMELIQIVGVIFALFALSRVVLQLKRRSISFNEGLFWIFVWGFVVIFLVFPEFFGYVAEVLGVGRGVDALI
YISIVVLFYLIYRLYAKINNLERQITHIVREIAIRDRYEPKKRD

Specific function: Unknown

COG id: COG2456

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH137

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1580_METJA (Q58975)

Other databases:

- EMBL:   L77117
- PIR:   C64497
- RefSeq:   NP_248589.1
- GeneID:   1452489
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1580
- NMPDR:   fig|243232.1.peg.1626
- TIGR:   MJ1580
- HOGENOM:   HBG555194
- OMA:   EIAINER
- ProtClustDB:   CLSK876631
- BioCyc:   MJAN243232:MJ_1580-MONOMER
- InterPro:   IPR019277

Pfam domain/function: PF10066 DUF2304

EC number: NA

Molecular weight: Translated: 14644; Mature: 14644

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe27127c)-; HASH(0xb572d94)-; HASH(0xb572d88)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKILEEKLMELIQIVGVIFALFALSRVVLQLKRRSISFNEGLFWIFVWGFVVIFLVFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EFFGYVAEVLGVGRGVDALIYISIVVLFYLIYRLYAKINNLERQITHIVREIAIRDRYEP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKRD
CCCH
>Mature Secondary Structure
MLIKILEEKLMELIQIVGVIFALFALSRVVLQLKRRSISFNEGLFWIFVWGFVVIFLVFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EFFGYVAEVLGVGRGVDALIYISIVVLFYLIYRLYAKINNLERQITHIVREIAIRDRYEP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKRD
CCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087