| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669764
Identifier: 15669764
GI number: 15669764
Start: 1544966
End: 1545634
Strand: Direct
Name: 15669764
Synonym: MJ1569
Alternate gene names: NA
Gene position: 1544966-1545634 (Clockwise)
Preceding gene: 15669760
Following gene: 15669765
Centisome position: 92.79
GC content: 38.71
Gene sequence:
>669_bases ATGCACATACCAGATGGCTACCTTGGCCCAATAACATGTGCTTTCTTCTATTTGATAATGATACCAATTTGGTATAAGAG TATTAAAGAGCTTAAAAAGTTAGACCCAAGAAAGTTGCCATTGTTGGGAGTTTTAACAGCTTTCTCTTTCTTAGTTATGA TGTTCAACCTTCCAGTTCCAGATGGAACAACAGCTCACATGGTTGGAGGGACATTGATAGCAATATTGATGGATAATCCA TGGGTTGCGACGATAGCAATATCTATTGTTTTAATTATACAGGCAATATTCTTTGGAGATGGGGGAATAACTTGTATTGG AGCAAACTGCTTCAATATGGGTGTTGTGTTACCGTTTGTTGGTTATTATGTTTATAAATTCTTAAGAGATAAGGTTGGAG AAGTAATTGCAAGTGGTATTGGGGCTTATGTTGGAATTGTTGCAGCAGCAATTGTTGCAGGCTTTGAGTTTGGATTACAG CCATTTATAGAGCCAGGTTATTGTCCATACCCTTTCACCGTCTCAGTTCCAGCAATGGCATTTGCTCACTTGATAACAGC AGGACCTGCAGCAGCGGTAGTAACTGCAATAGTTGTTTGGTATGTAAAGAAAGTAAGACCTGATTTATTCACATCAAAAG AACAGCAAGTTAGTGGGGTGAATGCATGA
Upstream 100 bases:
>100_bases CAAGACATTTTTAATAAACTTTAAACAAAAAAGTTTAAATAGTATTATCAACATTAGATATGATGATAACACAATTAAAT AATACCAAAAGGGTGAAACT
Downstream 100 bases:
>100_bases ATTGGCAAGACCCCTTAGTTAAAAAGTTTCTCTATTTAATTGTAGCTATGGTAATTCTCTGTCCTCTTGGAATATTGTTA GTTTGGAATTATGGAGATGC
Product: cobalt transport protein CbiM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVPDGTTAHMVGGTLIAILMDNP WVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFVGYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQ PFIEPGYCPYPFTVSVPAMAFAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA
Sequences:
>Translated_222_residues MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVPDGTTAHMVGGTLIAILMDNP WVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFVGYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQ PFIEPGYCPYPFTVSVPAMAFAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA >Mature_222_residues MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVPDGTTAHMVGGTLIAILMDNP WVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFVGYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQ PFIEPGYCPYPFTVSVPAMAFAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA
Specific function: Unknown
COG id: COG0310
COG function: function code P; ABC-type Co2+ transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1569_METJA (Q58964)
Other databases:
- EMBL: L77117 - PIR: H64495 - RefSeq: NP_248577.1 - ProteinModelPortal: Q58964 - GeneID: 1452477 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1569 - NMPDR: fig|243232.1.peg.1614 - TIGR: MJ1569 - HOGENOM: HBG662717 - OMA: MFNLPVP - ProtClustDB: PRK11909 - BioCyc: MJAN243232:MJ_1569-MONOMER - InterPro: IPR002751
Pfam domain/function: PF01891 CbiM
EC number: NA
Molecular weight: Translated: 23948; Mature: 23948
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb8037c8)-; HASH(0xb7e7c80)-; HASH(0xef23e54)-; HASH(0xb7dc28c)-; HASH(0xed8aa0c)-; HASH(0xef30b5c)-;
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC DGTTAHMVGGTLIAILMDNPWVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFV CCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH GYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQPFIEPGYCPYPFTVSVPAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHH FAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA HHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCCH >Mature Secondary Structure MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC DGTTAHMVGGTLIAILMDNPWVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFV CCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH GYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQPFIEPGYCPYPFTVSVPAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHH FAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA HHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087