The gene/protein map for NC_000909 is currently unavailable.
Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669756

Identifier: 15669756

GI number: 15669756

Start: 1536501

End: 1538162

Strand: Reverse

Name: 15669756

Synonym: MJ1561

Alternate gene names: NA

Gene position: 1538162-1536501 (Counterclockwise)

Preceding gene: 15669757

Following gene: 15669755

Centisome position: 92.38

GC content: 32.37

Gene sequence:

>1662_bases
ATGATAACCAATAAAATAAAAATATTCCTAATATCATTAATCTTTATTTCAGGAGTTTATGCTTTGCAGGTAGATGCTCC
TCAGTATCAGCCGAATGTTATTCATCCTGGGGATGATGTTGATTTGTGGATTAAAATAACTAATGATAATTATGATAATG
AAGTTAAAAACATAGTTGTTGAGGTTTCTCCACACTATCCATTTGAGTTAAGGCAGGTTAATCCAATTAAGGGGAAAGCA
ACAATCAGCCATTTAAATCCTGGAGAATCAGACACTGTATATTTCAAACTACATGTTGATGAAAATGCCCCATCAAGAGA
CTATGAAATAGATGTAAAGGTAAGTTATGATGAAATTAATAAAGAAGATGGGAAAGAAACAATCCACCACTATGAAATAA
CTAAAATCTATTACCTACATGTTTATGGAATAGCAAGCTTTGAAATTAATGGGAATTTTAGCCTAATTCCATCAAAAACT
CAAACAGTTCCAATTGAAATTATAAACACAGGAACAGGAACAGCTAAGGAAGTTAATCTGTATATTGGATATTCTTTAAA
CTCTGTAAATGCTGGTTCTGAGTCAGTTGAAGTATCTGCCTATGGGACAACCAAAACCCAAGAAAAAACTATTTACTACC
CAACAGCTGTTCCTATATCTAATCTACCAATTTCACCAGTTGGAGAAACAAAATTCTACTTAGGAGCTTTAAAGCCAGAT
AATAGCAGAGTAATTAATTTAAAGTTATACACTGCAAGCAATTTAGTTGAGGGCTGTTATCAAATCCCTGCAGTAATTAC
ATGGATAGATGAAGACGGAACTAAAAGGGCAGAGCAGATAACCATTGGAGCTTATGTAAAAGGAGATATTTTATTGGGAA
TATCTAATGTGGTAACTGACCCTAAGGAGATAAAGCCAGGAACAACTTATGTGAGAATTGATGTAACAATAACCAACAAT
GGACATGCAGAGGCGAAGGATGTTAAATTAAAATTAATAACAAATAAACCATTTAAAGATAGCTGGAGTAACTGCAATAT
AAAAGATGTTGGCAACTTATTGCCCGGAGTTTCAAAGACAGTATCTTTCTATGTGGATGTAGATAAATATGCCTCTGCTA
AGCATTATAAGCTTCCAATTGAAATTAGTTATTTAGATACTGCCAATAACAAATACAAAACTGAAAAATTCATAGACATC
TATGTTAAACCAAAGCCATTATTTGAGATTATAACAAAAGAAGTTAATGTAACTGCTGGAAAAGAAAACACCGTCTATAT
AACAATAAAGAACGTTGGTAGTGAAAAGGCAGAGAGAGTTAAGATTTCAGCAATTAGAAACTCTGGACAACCATTTGATT
ACCCAATTAAAAGTGACACTATTGGAACTCTCTACCCTAACCAAACAGGAACTGGAGTTATAGTTATAGATGTTGATAAA
AATGCTGAATCAAAGCCTTATATAATAACTATTGAAATAAGATGTGCAGGAGATAGTGATGAGGGAGATAATAACGTGTA
TGTCTATCAAGAACCGTTAAAAGTGGTAGTGAATAATTCAAATTCAAAAAGTTATTGGATATTGGGAATAATAGTGGTTA
TTGCCATTGTATTGGTTGTAGGATATGTATTTAAAAGAAAAAATAGCAAAGATAAAGAATAA

Upstream 100 bases:

>100_bases
CCTTCTGTATGGTGGTGGTTTTAACCTTACTACCAGCTTTAATTGTTATTGAAGAGAGGCATATAATGCCACTTATTAAG
AGATTGAAAGGTGATACTCA

Downstream 100 bases:

>100_bases
AACACTCTATTTATTTTTGTTTTTTGAATTTTTCCTATTTCATTTTTTTATTTTAACGTTTTTAGGTGGTTTTATGGGAA
AATTAGAGAAAAATGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MITNKIKIFLISLIFISGVYALQVDAPQYQPNVIHPGDDVDLWIKITNDNYDNEVKNIVVEVSPHYPFELRQVNPIKGKA
TISHLNPGESDTVYFKLHVDENAPSRDYEIDVKVSYDEINKEDGKETIHHYEITKIYYLHVYGIASFEINGNFSLIPSKT
QTVPIEIINTGTGTAKEVNLYIGYSLNSVNAGSESVEVSAYGTTKTQEKTIYYPTAVPISNLPISPVGETKFYLGALKPD
NSRVINLKLYTASNLVEGCYQIPAVITWIDEDGTKRAEQITIGAYVKGDILLGISNVVTDPKEIKPGTTYVRIDVTITNN
GHAEAKDVKLKLITNKPFKDSWSNCNIKDVGNLLPGVSKTVSFYVDVDKYASAKHYKLPIEISYLDTANNKYKTEKFIDI
YVKPKPLFEIITKEVNVTAGKENTVYITIKNVGSEKAERVKISAIRNSGQPFDYPIKSDTIGTLYPNQTGTGVIVIDVDK
NAESKPYIITIEIRCAGDSDEGDNNVYVYQEPLKVVVNNSNSKSYWILGIIVVIAIVLVVGYVFKRKNSKDKE

Sequences:

>Translated_553_residues
MITNKIKIFLISLIFISGVYALQVDAPQYQPNVIHPGDDVDLWIKITNDNYDNEVKNIVVEVSPHYPFELRQVNPIKGKA
TISHLNPGESDTVYFKLHVDENAPSRDYEIDVKVSYDEINKEDGKETIHHYEITKIYYLHVYGIASFEINGNFSLIPSKT
QTVPIEIINTGTGTAKEVNLYIGYSLNSVNAGSESVEVSAYGTTKTQEKTIYYPTAVPISNLPISPVGETKFYLGALKPD
NSRVINLKLYTASNLVEGCYQIPAVITWIDEDGTKRAEQITIGAYVKGDILLGISNVVTDPKEIKPGTTYVRIDVTITNN
GHAEAKDVKLKLITNKPFKDSWSNCNIKDVGNLLPGVSKTVSFYVDVDKYASAKHYKLPIEISYLDTANNKYKTEKFIDI
YVKPKPLFEIITKEVNVTAGKENTVYITIKNVGSEKAERVKISAIRNSGQPFDYPIKSDTIGTLYPNQTGTGVIVIDVDK
NAESKPYIITIEIRCAGDSDEGDNNVYVYQEPLKVVVNNSNSKSYWILGIIVVIAIVLVVGYVFKRKNSKDKE
>Mature_553_residues
MITNKIKIFLISLIFISGVYALQVDAPQYQPNVIHPGDDVDLWIKITNDNYDNEVKNIVVEVSPHYPFELRQVNPIKGKA
TISHLNPGESDTVYFKLHVDENAPSRDYEIDVKVSYDEINKEDGKETIHHYEITKIYYLHVYGIASFEINGNFSLIPSKT
QTVPIEIINTGTGTAKEVNLYIGYSLNSVNAGSESVEVSAYGTTKTQEKTIYYPTAVPISNLPISPVGETKFYLGALKPD
NSRVINLKLYTASNLVEGCYQIPAVITWIDEDGTKRAEQITIGAYVKGDILLGISNVVTDPKEIKPGTTYVRIDVTITNN
GHAEAKDVKLKLITNKPFKDSWSNCNIKDVGNLLPGVSKTVSFYVDVDKYASAKHYKLPIEISYLDTANNKYKTEKFIDI
YVKPKPLFEIITKEVNVTAGKENTVYITIKNVGSEKAERVKISAIRNSGQPFDYPIKSDTIGTLYPNQTGTGVIVIDVDK
NAESKPYIITIEIRCAGDSDEGDNNVYVYQEPLKVVVNNSNSKSYWILGIIVVIAIVLVVGYVFKRKNSKDKE

Specific function: Unknown

COG id: COG1361

COG function: function code M; S-layer domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0795 and MJ1506

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1561_METJA (Q58956)

Other databases:

- EMBL:   L77117
- PIR:   H64494
- RefSeq:   NP_248569.1
- ProteinModelPortal:   Q58956
- GeneID:   1452469
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1561
- NMPDR:   fig|243232.1.peg.1606
- TIGR:   MJ1561
- HOGENOM:   HBG541013
- OMA:   IDLYIKP
- ProtClustDB:   CLSK876604
- BioCyc:   MJAN243232:MJ_1561-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61714; Mature: 61714

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xef13244)-; HASH(0xe79bbfc)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITNKIKIFLISLIFISGVYALQVDAPQYQPNVIHPGDDVDLWIKITNDNYDNEVKNIVV
CCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEE
EVSPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYEIDVKVSYDEIN
EECCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHCC
KEDGKETIHHYEITKIYYLHVYGIASFEINGNFSLIPSKTQTVPIEIINTGTGTAKEVNL
CCCCCHHHEEEEEEEEEEEEEEEEEEEEECCCEEECCCCCCEEEEEEEECCCCCCEEEEE
YIGYSLNSVNAGSESVEVSAYGTTKTQEKTIYYPTAVPISNLPISPVGETKFYLGALKPD
EEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCC
NSRVINLKLYTASNLVEGCYQIPAVITWIDEDGTKRAEQITIGAYVKGDILLGISNVVTD
CCEEEEEEEEECHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEECEEEEEEHHHCCC
PKEIKPGTTYVRIDVTITNNGHAEAKDVKLKLITNKPFKDSWSNCNIKDVGNLLPGVSKT
HHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCE
VSFYVDVDKYASAKHYKLPIEISYLDTANNKYKTEKFIDIYVKPKPLFEIITKEVNVTAG
EEEEEEEHHHCCCCEEEEEEEEEEEECCCCCEECEEEEEEEECCCHHHHHHHHHEEEEEC
KENTVYITIKNVGSEKAERVKISAIRNSGQPFDYPIKSDTIGTLYPNQTGTGVIVIDVDK
CCCEEEEEEECCCCCCHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC
NAESKPYIITIEIRCAGDSDEGDNNVYVYQEPLKVVVNNSNSKSYWILGIIVVIAIVLVV
CCCCCCEEEEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCEEHHHHHHHHHHHHHH
GYVFKRKNSKDKE
HHHHHCCCCCCCH
>Mature Secondary Structure
MITNKIKIFLISLIFISGVYALQVDAPQYQPNVIHPGDDVDLWIKITNDNYDNEVKNIVV
CCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEE
EVSPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYEIDVKVSYDEIN
EECCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHCC
KEDGKETIHHYEITKIYYLHVYGIASFEINGNFSLIPSKTQTVPIEIINTGTGTAKEVNL
CCCCCHHHEEEEEEEEEEEEEEEEEEEEECCCEEECCCCCCEEEEEEEECCCCCCEEEEE
YIGYSLNSVNAGSESVEVSAYGTTKTQEKTIYYPTAVPISNLPISPVGETKFYLGALKPD
EEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCC
NSRVINLKLYTASNLVEGCYQIPAVITWIDEDGTKRAEQITIGAYVKGDILLGISNVVTD
CCEEEEEEEEECHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEECEEEEEEHHHCCC
PKEIKPGTTYVRIDVTITNNGHAEAKDVKLKLITNKPFKDSWSNCNIKDVGNLLPGVSKT
HHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCE
VSFYVDVDKYASAKHYKLPIEISYLDTANNKYKTEKFIDIYVKPKPLFEIITKEVNVTAG
EEEEEEEHHHCCCCEEEEEEEEEEEECCCCCEECEEEEEEEECCCHHHHHHHHHEEEEEC
KENTVYITIKNVGSEKAERVKISAIRNSGQPFDYPIKSDTIGTLYPNQTGTGVIVIDVDK
CCCEEEEEEECCCCCCHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC
NAESKPYIITIEIRCAGDSDEGDNNVYVYQEPLKVVVNNSNSKSYWILGIIVVIAIVLVV
CCCCCCEEEEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCEEHHHHHHHHHHHHHH
GYVFKRKNSKDKE
HHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087