| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669743
Identifier: 15669743
GI number: 15669743
Start: 1526057
End: 1526425
Strand: Direct
Name: 15669743
Synonym: MJ1548
Alternate gene names: NA
Gene position: 1526057-1526425 (Clockwise)
Preceding gene: 15669742
Following gene: 15669744
Centisome position: 91.66
GC content: 29.81
Gene sequence:
>369_bases ATGAGATTACAAAAAGGGCTTTATTATATTTCTCTTCAAGTATGTGTTGATATTACTATGGACGTTGTAGCAATGCTCGT TAAAGACATTGGGTTGAATGTTGAAGATGATTATACAAACATTAAGAAACTTTTGAAGCATGATGTTATTACAAAAGATG AAGCTACTCTACTAAAACAATATAACAGGCTTAGAAACGCTATTGTCCATAAATACGATAAATTAAACTTAGAAGTTGTA AAAGAAGGTTTAAAAAGAATTGATGAACTCTATGAAATCGCATACGAAAGTATGCGAGTAATGAAATGCGAAGCATTTCA TCTGATAATAATTAAACTCATTGAATTCTATGAAAAGGTGGAAGAATGA
Upstream 100 bases:
>100_bases TGTTGAGGAGGAGATTTAATGCAAAGAAAGAAGAGATACTTGGATAAGCTTGAAAAGTTTGGGGAAGAATATTACTTCAT AAAAGAACATGAAATAAGGG
Downstream 100 bases:
>100_bases GAGATGTTGCCATTATCGGCTATGGACAGACAAAGTTTGGCGAGCTATGGGAAAGAAGTTTTAGAAGCTTGATTGTTGAG GCTGGTGTTAAGGCAGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQYNRLRNAIVHKYDKLNLEVV KEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKVEE
Sequences:
>Translated_122_residues MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQYNRLRNAIVHKYDKLNLEVV KEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKVEE >Mature_122_residues MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQYNRLRNAIVHKYDKLNLEVV KEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKVEE
Specific function: Unknown
COG id: COG2445
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family. MJ1548 subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1548_METJA (Q58943)
Other databases:
- EMBL: L77117 - PIR: C64493 - RefSeq: NP_248556.1 - ProteinModelPortal: Q58943 - GeneID: 1452456 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1548 - NMPDR: fig|243232.1.peg.1593 - TIGR: MJ1548 - OMA: VEREINF - ProtClustDB: CLSK541594 - BioCyc: MJAN243232:MJ_1548-MONOMER - InterPro: IPR008201
Pfam domain/function: PF01934 DUF86
EC number: NA
Molecular weight: Translated: 14470; Mature: 14470
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH YNRLRNAIVHKYDKLNLEVVKEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EE CC >Mature Secondary Structure MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH YNRLRNAIVHKYDKLNLEVVKEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087