| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669711
Identifier: 15669711
GI number: 15669711
Start: 1491468
End: 1491935
Strand: Reverse
Name: 15669711
Synonym: MJ1516.1
Alternate gene names: NA
Gene position: 1491935-1491468 (Counterclockwise)
Preceding gene: 15669715
Following gene: 15669707
Centisome position: 89.61
GC content: 33.97
Gene sequence:
>468_bases ATGACAAGGAGTAGTAGTGTGGATGTTGTTGTTAGACACTTCTTTTTGTCTTTAAATATAAGGCGTGGTAGAATTACTGG CACTCCAATGATTCCATATAACGGCCATAATGGAGCTATAGAATACAACACCAACGTCGCAAAAAACCAGCAAAAAATTC TTAACATTATTTTTAGAAATCCCATACTGCCACCGAATATTCAGTCCTTTAAGAAATCGAACAGCATACCCAACATAGTA AAAACCATCAATAATGCAAATACCGTTACCACAAGTGCAAATACTCCCATTCCTACCTCTCCAAAGTTAGAGGAGATTAA TCCATCAATTATCATCCCAATACACAAGACTGAAAACATTATCCCTCCTATAATAAAGAAAATACACGCTATCAGGAATA TTATAACCATTACACTTATTATGAGTTCAATTAAATCCAATATCATCAAATCTCCTCCAAAAAATTAA
Upstream 100 bases:
>100_bases AGCTTCACCATTTTACTTCACCAATTCCTTAGAGATGTAATAGCCCATAACAATAGGAAATATCAGAAATCCAATAAGAA TCAGCAATTCAGGAAGAAAT
Downstream 100 bases:
>100_bases AAATTAATCATCTTTGCTGAAGATTATTGAATAAAGTTGGGCATTGTAATCCTTTGCTGACTTGTAGGCATCATAAATGC TATAAATCCATGGTATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTRSSSVDVVVRHFFLSLNIRRGRITGTPMIPYNGHNGAIEYNTNVAKNQQKILNIIFRNPILPPNIQSFKKSNSIPNIV KTINNANTVTTSANTPIPTSPKLEEINPSIIIPIHKTENIIPPIIKKIHAIRNIITITLIMSSIKSNIIKSPPKN
Sequences:
>Translated_155_residues MTRSSSVDVVVRHFFLSLNIRRGRITGTPMIPYNGHNGAIEYNTNVAKNQQKILNIIFRNPILPPNIQSFKKSNSIPNIV KTINNANTVTTSANTPIPTSPKLEEINPSIIIPIHKTENIIPPIIKKIHAIRNIITITLIMSSIKSNIIKSPPKN >Mature_154_residues TRSSSVDVVVRHFFLSLNIRRGRITGTPMIPYNGHNGAIEYNTNVAKNQQKILNIIFRNPILPPNIQSFKKSNSIPNIVK TINNANTVTTSANTPIPTSPKLEEINPSIIIPIHKTENIIPPIIKKIHAIRNIITITLIMSSIKSNIIKSPPKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YF1B_METJA (P81235)
Other databases:
- EMBL: L77117 - RefSeq: NP_248524.1 - ProteinModelPortal: P81235 - GeneID: 1452424 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1516.1 - NMPDR: fig|243232.1.peg.1561 - TIGR: MJ1516.1 - BioCyc: MJAN243232:MJ_1516.1-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17260; Mature: 17128
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSSSVDVVVRHFFLSLNIRRGRITGTPMIPYNGHNGAIEYNTNVAKNQQKILNIIFRN CCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC PILPPNIQSFKKSNSIPNIVKTINNANTVTTSANTPIPTSPKLEEINPSIIIPIHKTENI CCCCCCHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCC IPPIIKKIHAIRNIITITLIMSSIKSNIIKSPPKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TRSSSVDVVVRHFFLSLNIRRGRITGTPMIPYNGHNGAIEYNTNVAKNQQKILNIIFRN CCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC PILPPNIQSFKKSNSIPNIVKTINNANTVTTSANTPIPTSPKLEEINPSIIIPIHKTENI CCCCCCHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCC IPPIIKKIHAIRNIITITLIMSSIKSNIIKSPPKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087