| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is yleA [C]
Identifier: 15669680
GI number: 15669680
Start: 1459011
End: 1460291
Strand: Direct
Name: yleA [C]
Synonym: MJ1487
Alternate gene names: 15669680
Gene position: 1459011-1460291 (Clockwise)
Preceding gene: 15669678
Following gene: 15669681
Centisome position: 87.63
GC content: 30.6
Gene sequence:
>1281_bases ATGGAAGAAAACACCGCTTTGGTAGTTTATTATACAAAACTACATAAAAACAGTTTCAATGCATTGATTGGAGCTTTAGA GATTGATGAATATTTTGATAACCTCCCAATATATTTTGCCAATAAAAAAGATATTTTTAATTTAAAGGAAGTTTTAAAAA AATATGACAAGGTTGTTATTGCCATATCTTTCTTTACAACTGAACTCTGGAAAACTTATGAATTAATTAATGAATTAAAA GCTAAATATCAAAGTTATAGGAATAAAATTATTTATTTAGCTGGAGGACCTCATCCAACAGGTGACCCAAAAGGAACGTT AAAATTGGGATTTGATGTTGTTTGCATTGGAGAGGGAGAAGAGACGTTTCCAGAATTTATAAAGGCGGTTAATGAAGATG AGGATTATAAAAAAGTTAAAGGTATTGCCTATTTAAATGATAATGAATTTATTTACACTGGAAGAAGAAAACCTGTTGAT TTAAATAAGTATCCACCATTTCCTGTAAAGCATAATAAATTTGGACATATAGAGATAACGAGAGGTTGTCCTTACAAATG CTATTTCTGTCAAACACCAAGAATCTTTGGAAAAAAGATAAGGCATAGGGATGTTGAAAATATATATAAATATGTTGAAA TAATGGCTGAAAGGAATTTGAAAGATATAAGGTTTATAACTCCAAATGCCTTTGGCTATGGTTCTAAAGACGGAAAAACA TTAAATATTGATAAAATTGAAAAACTATTAGAAAGTATTAGAGAAATTTTAGGTAATAATGGAAGGATATTTTTTGGAAC ATTTCCCTCTGAAGTTAGACCAGAGCATGTGAATATTGAGACGGTAGATTTAATTTTAAGATATGCTGATAATAAGAATT TAGTTATTGGTGCTCAATCTGGTAGTGAAAAAGTATTAGAACTATGCCATAGGGGACATACGGTTGAAGATGTCTATAAC GCTGTAAGAGTAGCGAGAAAAGCTGGACTTGGAGTAGATGTAGATTTTATTTTTGGTTTGCCTGGAGAAACTGAGGAAGA TGTAGAAAAGACAATAAAGGTTATGAAGGATTTAATAAAAATGGGTGCTAAAATACATGCTCATACTTTTATGCCTTTAC CACAAACACCCTTTGCTAAGGCAAATCCTGGGAAAGTTGATAAAAAGATAATAAGAGCTATGAGGTATGAGATTCCTAAG GGTATATTTCACGGAACATGGCATAATCAGGAAATAATTGCTCAAAAGATATCAAAATATTTAAAAACTGGGAAATTATA A
Upstream 100 bases:
>100_bases AGCATTAAAATTTTATTCTATACTTTAGCTTTTAAAGGAATCATTAATATAGTTTTTTGTTAATTATCTCATTTGAGATA AATATTGTTTAGGGAGCAAT
Downstream 100 bases:
>100_bases ACAAATAAGGGAGATATTATGAGAATTGGTATTGTTGGAGCCGGATTAGGTGGATTATTAGCTGGAGCATTGTTATCTAA GAATCATGAAGTTGTTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELK AKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVD LNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYN AVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPK GIFHGTWHNQEIIAQKISKYLKTGKL
Sequences:
>Translated_426_residues MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELK AKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVD LNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYN AVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPK GIFHGTWHNQEIIAQKISKYLKTGKL >Mature_426_residues MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELK AKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVD LNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYN AVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPK GIFHGTWHNQEIIAQKISKYLKTGKL
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain
Homologues:
Organism=Escherichia coli, GI1786882, Length=243, Percent_Identity=28.3950617283951, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1487_METJA (Q58882)
Other databases:
- EMBL: L77117 - PIR: F64485 - RefSeq: NP_248493.1 - ProteinModelPortal: Q58882 - SMR: Q58882 - GeneID: 1452393 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1487 - NMPDR: fig|243232.1.peg.1530 - TIGR: MJ1487 - HOGENOM: HBG465651 - OMA: DFIFGFP - ProtClustDB: CLSK865256 - BioCyc: MJAN243232:MJ_1487-MONOMER - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 - PANTHER: PTHR11918 - SMART: SM00729
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM
EC number: NA
Molecular weight: Translated: 48962; Mature: 48962
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS51332 B12_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVI CCCCCEEEEEEEEECCCCHHHHHHHEEHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEE AISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGE EEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECEEEEEECCCC ETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVDLNKYPPFPVKHNKFGHIEIT HHHHHHHHHCCCCHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE RGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT CCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQS ECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEEEEECCCCCEEEECCC GSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIK CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH MGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTWHNQEIIAQKISKY HCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LKTGKL HHCCCC >Mature Secondary Structure MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVI CCCCCEEEEEEEEECCCCHHHHHHHEEHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEE AISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGE EEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECEEEEEECCCC ETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVDLNKYPPFPVKHNKFGHIEIT HHHHHHHHHCCCCHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE RGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT CCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQS ECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEEEEECCCCCEEEECCC GSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIK CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH MGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTWHNQEIIAQKISKY HCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LKTGKL HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087