Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is yleA [C]

Identifier: 15669680

GI number: 15669680

Start: 1459011

End: 1460291

Strand: Direct

Name: yleA [C]

Synonym: MJ1487

Alternate gene names: 15669680

Gene position: 1459011-1460291 (Clockwise)

Preceding gene: 15669678

Following gene: 15669681

Centisome position: 87.63

GC content: 30.6

Gene sequence:

>1281_bases
ATGGAAGAAAACACCGCTTTGGTAGTTTATTATACAAAACTACATAAAAACAGTTTCAATGCATTGATTGGAGCTTTAGA
GATTGATGAATATTTTGATAACCTCCCAATATATTTTGCCAATAAAAAAGATATTTTTAATTTAAAGGAAGTTTTAAAAA
AATATGACAAGGTTGTTATTGCCATATCTTTCTTTACAACTGAACTCTGGAAAACTTATGAATTAATTAATGAATTAAAA
GCTAAATATCAAAGTTATAGGAATAAAATTATTTATTTAGCTGGAGGACCTCATCCAACAGGTGACCCAAAAGGAACGTT
AAAATTGGGATTTGATGTTGTTTGCATTGGAGAGGGAGAAGAGACGTTTCCAGAATTTATAAAGGCGGTTAATGAAGATG
AGGATTATAAAAAAGTTAAAGGTATTGCCTATTTAAATGATAATGAATTTATTTACACTGGAAGAAGAAAACCTGTTGAT
TTAAATAAGTATCCACCATTTCCTGTAAAGCATAATAAATTTGGACATATAGAGATAACGAGAGGTTGTCCTTACAAATG
CTATTTCTGTCAAACACCAAGAATCTTTGGAAAAAAGATAAGGCATAGGGATGTTGAAAATATATATAAATATGTTGAAA
TAATGGCTGAAAGGAATTTGAAAGATATAAGGTTTATAACTCCAAATGCCTTTGGCTATGGTTCTAAAGACGGAAAAACA
TTAAATATTGATAAAATTGAAAAACTATTAGAAAGTATTAGAGAAATTTTAGGTAATAATGGAAGGATATTTTTTGGAAC
ATTTCCCTCTGAAGTTAGACCAGAGCATGTGAATATTGAGACGGTAGATTTAATTTTAAGATATGCTGATAATAAGAATT
TAGTTATTGGTGCTCAATCTGGTAGTGAAAAAGTATTAGAACTATGCCATAGGGGACATACGGTTGAAGATGTCTATAAC
GCTGTAAGAGTAGCGAGAAAAGCTGGACTTGGAGTAGATGTAGATTTTATTTTTGGTTTGCCTGGAGAAACTGAGGAAGA
TGTAGAAAAGACAATAAAGGTTATGAAGGATTTAATAAAAATGGGTGCTAAAATACATGCTCATACTTTTATGCCTTTAC
CACAAACACCCTTTGCTAAGGCAAATCCTGGGAAAGTTGATAAAAAGATAATAAGAGCTATGAGGTATGAGATTCCTAAG
GGTATATTTCACGGAACATGGCATAATCAGGAAATAATTGCTCAAAAGATATCAAAATATTTAAAAACTGGGAAATTATA
A

Upstream 100 bases:

>100_bases
AGCATTAAAATTTTATTCTATACTTTAGCTTTTAAAGGAATCATTAATATAGTTTTTTGTTAATTATCTCATTTGAGATA
AATATTGTTTAGGGAGCAAT

Downstream 100 bases:

>100_bases
ACAAATAAGGGAGATATTATGAGAATTGGTATTGTTGGAGCCGGATTAGGTGGATTATTAGCTGGAGCATTGTTATCTAA
GAATCATGAAGTTGTTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELK
AKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVD
LNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT
LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYN
AVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPK
GIFHGTWHNQEIIAQKISKYLKTGKL

Sequences:

>Translated_426_residues
MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELK
AKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVD
LNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT
LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYN
AVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPK
GIFHGTWHNQEIIAQKISKYLKTGKL
>Mature_426_residues
MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELK
AKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVD
LNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT
LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYN
AVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPK
GIFHGTWHNQEIIAQKISKYLKTGKL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain

Homologues:

Organism=Escherichia coli, GI1786882, Length=243, Percent_Identity=28.3950617283951, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1487_METJA (Q58882)

Other databases:

- EMBL:   L77117
- PIR:   F64485
- RefSeq:   NP_248493.1
- ProteinModelPortal:   Q58882
- SMR:   Q58882
- GeneID:   1452393
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1487
- NMPDR:   fig|243232.1.peg.1530
- TIGR:   MJ1487
- HOGENOM:   HBG465651
- OMA:   DFIFGFP
- ProtClustDB:   CLSK865256
- BioCyc:   MJAN243232:MJ_1487-MONOMER
- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197
- PANTHER:   PTHR11918
- SMART:   SM00729

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 48962; Mature: 48962

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS51332 B12_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVI
CCCCCEEEEEEEEECCCCHHHHHHHEEHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEE
AISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGE
EEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECEEEEEECCCC
ETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVDLNKYPPFPVKHNKFGHIEIT
HHHHHHHHHCCCCHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
RGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT
CCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE
LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQS
ECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEEEEECCCCCEEEECCC
GSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIK
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
MGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTWHNQEIIAQKISKY
HCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LKTGKL
HHCCCC
>Mature Secondary Structure
MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVI
CCCCCEEEEEEEEECCCCHHHHHHHEEHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEE
AISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGE
EEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECEEEEEECCCC
ETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVDLNKYPPFPVKHNKFGHIEIT
HHHHHHHHHCCCCHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
RGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKT
CCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE
LNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQS
ECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEEEEECCCCCEEEECCC
GSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIK
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
MGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTWHNQEIIAQKISKY
HCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LKTGKL
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087