| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669673
Identifier: 15669673
GI number: 15669673
Start: 1451447
End: 1452718
Strand: Direct
Name: 15669673
Synonym: MJ1480
Alternate gene names: NA
Gene position: 1451447-1452718 (Clockwise)
Preceding gene: 15669671
Following gene: 15669674
Centisome position: 87.18
GC content: 37.11
Gene sequence:
>1272_bases ATGTTCATGAGAGAAATTGAATTGAGAGGGCATATTATTGACAGCTTAATCCTGCCTAAGGTTTTTGATAAAATCTTAGA TATGGGCGGAGATTATAAAGTTTTAGAGTTTGAGATTGGGAAGAGAAAAACAGACCCAAGTTATGCAAAGATATTGGTTA TTGGTAGAGATGAAAGGCATGTAGATGAAATATTGAATGAGTTGAGGGATTTAGGAGCTGAGATTCCAGAGATTGAAGAG GTTGAGTTACAGCCAGCTGAGAAGGATATGGTCTTACCAGAGGGCTTTTATTCAACAACCAATCATAAAACATTTATTAG GTTCAAAGGCAAATGGATAGAGGTTGAAAACCAAAAAATGGACGGAGCTATCGTTGTTTATCCAGATGAAATGAGGGCTG AAGTAAAGACAATAAGAAATATCAAAAAAGGAGATTTAGTTGTTGTTGGGCATAAAGGGGTTAGAGTCATCCCTCCAGAA AAACCAAGAGAAGGAGGGGGGTTATTTGAGTTTATGAAATCAGATGCCTCCTCAGAAAAGCCTAAAGAAACAATTATTAG AAGAATAGCTAAGGAGATGTATGAGATTAGAGAAAAATATAGAAAGACAGGTAAAGGAGGAATTGTAGTTGTTGGAGGTC CGGCTATAATTCACACTGGAGCTGGATGGGCTTTAGCTAAGCTTATTAGGATGGGGTATGTTCAAGCACTATTTGCTGGA AATGCCTTAGCTACTCATGACATAGAGAGCGTTTTATATGGGACATCTTTAGGAGTTGATTTAAAGACTGGAAAGAGCGT TCCAGGAGGGCATAGTCATCATTTAAGGGCTATAAATACAATAATGAGGGCTGGAAGCATAAAAGATGCTGTAGAGCAGG GAATTTTAAAGGAAGGAGTTATGTATGAGTGTATAAAAAACAACATTCCTTATGTTTTAGCTGGAAGTATCAGGGATGAT GGCCCATTACCAGATGTTATTACAGATGTTGTTAAAGCTCAGGAAAAAATGAGAGAGCTTTTAAAAGGAAAGGATATGGT TCTAATGCTTTCTACTATGCTACACTCAATAGCTACAGGTAATTTATTACCTTCATGGGTTAAAACCATCTGCGTTGATA TAAATCCAGCGGTTGTAACAAAGTTAATGGATAGAGGGACATCACAAGCTTTGGGGATAGTTACTGATGTTGGTGTCTTT TTACCAATGCTTGTTGAGGAGTTGGAAAAATTAGAGAAAGAAAAGGAAAAATCTGAAAAGAGAGAAGAATAG
Upstream 100 bases:
>100_bases TTAAAAACTGTCAAAATAGTATATAAAGGTTTTGATGACAATTGTTAAATACTTCATCATCGTTAATTAATCCTAAGATA ACATTTATTGGGGGATTTTT
Downstream 100 bases:
>100_bases AGGAGGAGAAGATGAGAGTTGAATATTCAAAGGATTTGATAAGAAAGGGAATTTCAACTATTTCCCAACTAAAAAAAGCT AAAATAAGAGTAGAAAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MFMREIELRGHIIDSLILPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGRDERHVDEILNELRDLGAEIPEIEE VELQPAEKDMVLPEGFYSTTNHKTFIRFKGKWIEVENQKMDGAIVVYPDEMRAEVKTIRNIKKGDLVVVGHKGVRVIPPE KPREGGGLFEFMKSDASSEKPKETIIRRIAKEMYEIREKYRKTGKGGIVVVGGPAIIHTGAGWALAKLIRMGYVQALFAG NALATHDIESVLYGTSLGVDLKTGKSVPGGHSHHLRAINTIMRAGSIKDAVEQGILKEGVMYECIKNNIPYVLAGSIRDD GPLPDVITDVVKAQEKMRELLKGKDMVLMLSTMLHSIATGNLLPSWVKTICVDINPAVVTKLMDRGTSQALGIVTDVGVF LPMLVEELEKLEKEKEKSEKREE
Sequences:
>Translated_423_residues MFMREIELRGHIIDSLILPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGRDERHVDEILNELRDLGAEIPEIEE VELQPAEKDMVLPEGFYSTTNHKTFIRFKGKWIEVENQKMDGAIVVYPDEMRAEVKTIRNIKKGDLVVVGHKGVRVIPPE KPREGGGLFEFMKSDASSEKPKETIIRRIAKEMYEIREKYRKTGKGGIVVVGGPAIIHTGAGWALAKLIRMGYVQALFAG NALATHDIESVLYGTSLGVDLKTGKSVPGGHSHHLRAINTIMRAGSIKDAVEQGILKEGVMYECIKNNIPYVLAGSIRDD GPLPDVITDVVKAQEKMRELLKGKDMVLMLSTMLHSIATGNLLPSWVKTICVDINPAVVTKLMDRGTSQALGIVTDVGVF LPMLVEELEKLEKEKEKSEKREE >Mature_423_residues MFMREIELRGHIIDSLILPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGRDERHVDEILNELRDLGAEIPEIEE VELQPAEKDMVLPEGFYSTTNHKTFIRFKGKWIEVENQKMDGAIVVYPDEMRAEVKTIRNIKKGDLVVVGHKGVRVIPPE KPREGGGLFEFMKSDASSEKPKETIIRRIAKEMYEIREKYRKTGKGGIVVVGGPAIIHTGAGWALAKLIRMGYVQALFAG NALATHDIESVLYGTSLGVDLKTGKSVPGGHSHHLRAINTIMRAGSIKDAVEQGILKEGVMYECIKNNIPYVLAGSIRDD GPLPDVITDVVKAQEKMRELLKGKDMVLMLSTMLHSIATGNLLPSWVKTICVDINPAVVTKLMDRGTSQALGIVTDVGVF LPMLVEELEKLEKEKEKSEKREE
Specific function: Unknown
COG id: COG1915
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1480_METJA (Q58875)
Other databases:
- EMBL: L77117 - PIR: G64484 - RefSeq: NP_248486.1 - PDB: 3MGJ - PDBsum: 3MGJ - ProteinModelPortal: Q58875 - SMR: Q58875 - GeneID: 1452386 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1480 - NMPDR: fig|243232.1.peg.1523 - TIGR: MJ1480 - HOGENOM: HBG481668 - OMA: ATHDIES - ProtClustDB: CLSK862676 - BioCyc: MJAN243232:MJ_1480-MONOMER - InterPro: IPR005239 - InterPro: IPR007545 - TIGRFAMs: TIGR00300
Pfam domain/function: PF04455 Saccharop_dh_N
EC number: NA
Molecular weight: Translated: 47182; Mature: 47182
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMREIELRGHIIDSLILPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGRDERH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCHHH VDEILNELRDLGAEIPEIEEVELQPAEKDMVLPEGFYSTTNHKTFIRFKGKWIEVENQKM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCC DGAIVVYPDEMRAEVKTIRNIKKGDLVVVGHKGVRVIPPEKPREGGGLFEFMKSDASSEK CCEEEEECHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHCCCCCCC PKETIIRRIAKEMYEIREKYRKTGKGGIVVVGGPAIIHTGAGWALAKLIRMGYVQALFAG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCC NALATHDIESVLYGTSLGVDLKTGKSVPGGHSHHLRAINTIMRAGSIKDAVEQGILKEGV CCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCH MYECIKNNIPYVLAGSIRDDGPLPDVITDVVKAQEKMRELLKGKDMVLMLSTMLHSIATG HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC NLLPSWVKTICVDINPAVVTKLMDRGTSQALGIVTDVGVFLPMLVEELEKLEKEKEKSEK CCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REE CCC >Mature Secondary Structure MFMREIELRGHIIDSLILPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGRDERH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCHHH VDEILNELRDLGAEIPEIEEVELQPAEKDMVLPEGFYSTTNHKTFIRFKGKWIEVENQKM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCC DGAIVVYPDEMRAEVKTIRNIKKGDLVVVGHKGVRVIPPEKPREGGGLFEFMKSDASSEK CCEEEEECHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHCCCCCCC PKETIIRRIAKEMYEIREKYRKTGKGGIVVVGGPAIIHTGAGWALAKLIRMGYVQALFAG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCC NALATHDIESVLYGTSLGVDLKTGKSVPGGHSHHLRAINTIMRAGSIKDAVEQGILKEGV CCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCH MYECIKNNIPYVLAGSIRDDGPLPDVITDVVKAQEKMRELLKGKDMVLMLSTMLHSIATG HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC NLLPSWVKTICVDINPAVVTKLMDRGTSQALGIVTDVGVFLPMLVEELEKLEKEKEKSEK CCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087