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The map label for this gene is ydaO [C]

Identifier: 15669670

GI number: 15669670

Start: 1448532

End: 1449443

Strand: Reverse

Name: ydaO [C]

Synonym: MJ1478

Alternate gene names: 15669670

Gene position: 1449443-1448532 (Counterclockwise)

Preceding gene: 15669672

Following gene: 15669665

Centisome position: 87.06

GC content: 31.47

Gene sequence:

>912_bases
ATGGTGAAAACAATGAAATGCAAATTTTGTGATAAAAAGAGTTATATAAAGCTCAAATCACCAAAGATGTATCTATGCAA
AGAGCATTTTGTTGAATATTTTGAAAATAAGGTTAAAAAATCAATAGATAAGTATAAAATGCTAAGTAAAGATGAAAAAA
TCTTAGTTGCTGTTTCTGGAGGTAAGGATGGGCATGCAGCTGCATGGGTTTTGAAAAAACTCGGCTATAATATTGAGTTA
TTCCACATAAATTTAGGGATTGAGGGATTTTCTGAAGAATCTTTAAAGGCTGTAAAGGAGTTGGCTGAAAAATTGGAAGT
TCCTTTGCATGTTGTTAATTTAAAAGACATTACTGGAAAGACAATGGAGGATATTAGAGGTAAGAAATGCTCTATATGTG
GAACAACTAAAAGATATTTAATGAACAAGTTTGGTTATGAAAATGGATTTGATGTCATCGTTACTGGGCATAATTTGGAT
GATGAAGTTTCCTTTATTTTAAACAACTTATTCAATTGGAATATTAGATATTTAGCTAAGCATGAGCCAGTTCTTCCAGC
TCATGATAAATTTTTAAAGAAGGTTAAGATATTCTTTGAAATTGAGGAAGAGTTAATTTTAAAGTATGCTGAAGCTGAAG
AAATCCCATATACAACCGTTGAATGCAAATATGCTGAGAGAGCTATAACCTTAAAGCATAGAGCTTATTTAAATGAGTTA
GAAAAGGAAAGGCCAGGTATAAAGTATCAATTCCTATCTGGCTATATGAAAAATAGGCATCTGTTTAAAGTTGAGGAAGA
GGATTTCCAATTTAGAGAGTGTGAGGTTTGTGGAATGACATCTGCTGGAAAAATCTGCTCATTCTGTAGAGTTTGGAAGC
TCTATAAGAAAAAGAAAGAAAATAGAAATTAA

Upstream 100 bases:

>100_bases
CTATAGAAAAGGCACTTATAAAACCAAAGACTTTTATATTCTTACCTTAAAAATTGCAGTTAATTTTGAAAAGCACGATA
AACGATAATTCCCTAAATAT

Downstream 100 bases:

>100_bases
TTTATCAATTTTAGCCACCATGTATTTAGTTCGTCTAATTCTCTATCGGATTTAGCAACATAGGGGACATACCCTTTATC
TAAGCTTTTATTAATAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MVKTMKCKFCDKKSYIKLKSPKMYLCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSGGKDGHAAAWVLKKLGYNIEL
FHINLGIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGKTMEDIRGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLD
DEVSFILNNLFNWNIRYLAKHEPVLPAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNEL
EKERPGIKYQFLSGYMKNRHLFKVEEEDFQFRECEVCGMTSAGKICSFCRVWKLYKKKKENRN

Sequences:

>Translated_303_residues
MVKTMKCKFCDKKSYIKLKSPKMYLCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSGGKDGHAAAWVLKKLGYNIEL
FHINLGIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGKTMEDIRGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLD
DEVSFILNNLFNWNIRYLAKHEPVLPAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNEL
EKERPGIKYQFLSGYMKNRHLFKVEEEDFQFRECEVCGMTSAGKICSFCRVWKLYKKKKENRN
>Mature_303_residues
MVKTMKCKFCDKKSYIKLKSPKMYLCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSGGKDGHAAAWVLKKLGYNIEL
FHINLGIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGKTMEDIRGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLD
DEVSFILNNLFNWNIRYLAKHEPVLPAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNEL
EKERPGIKYQFLSGYMKNRHLFKVEEEDFQFRECEVCGMTSAGKICSFCRVWKLYKKKKENRN

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family

Homologues:

Organism=Homo sapiens, GI222537719, Length=306, Percent_Identity=26.4705882352941, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17540090, Length=291, Percent_Identity=28.8659793814433, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6321227, Length=149, Percent_Identity=30.2013422818792, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651972, Length=292, Percent_Identity=29.1095890410959, Blast_Score=128, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1478_METJA (Q58873)

Other databases:

- EMBL:   L77117
- PIR:   E64484
- RefSeq:   NP_248483.1
- ProteinModelPortal:   Q58873
- GeneID:   1452383
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1478
- NMPDR:   fig|243232.1.peg.1520
- TIGR:   MJ1478
- HOGENOM:   HBG541846
- OMA:   AYDNGFD
- ProtClustDB:   CLSK254378
- BioCyc:   MJAN243232:MJ_1478-MONOMER
- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR020554
- Gene3D:   G3DSA:3.40.50.620
- PIRSF:   PIRSF004976

Pfam domain/function: PF01171 ATP_bind_3

EC number: NA

Molecular weight: Translated: 35543; Mature: 35543

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS01263 UPF0021

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTMKCKFCDKKSYIKLKSPKMYLCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSG
CCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GKDGHAAAWVLKKLGYNIELFHINLGIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGK
CCCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
TMEDIRGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNLFNWNIRYLAK
HHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
HEPVLPAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNEL
CCCCCCCHHHHHHHHHHHEEECHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHH
EKERPGIKYQFLSGYMKNRHLFKVEEEDFQFRECEVCGMTSAGKICSFCRVWKLYKKKKE
HHHCCCCEEHHHHHHHCCCEEEEECCCCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHC
NRN
CCC
>Mature Secondary Structure
MVKTMKCKFCDKKSYIKLKSPKMYLCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSG
CCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GKDGHAAAWVLKKLGYNIELFHINLGIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGK
CCCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
TMEDIRGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNLFNWNIRYLAK
HHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
HEPVLPAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNEL
CCCCCCCHHHHHHHHHHHEEECHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHH
EKERPGIKYQFLSGYMKNRHLFKVEEEDFQFRECEVCGMTSAGKICSFCRVWKLYKKKKE
HHHCCCCEEHHHHHHHCCCEEEEECCCCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHC
NRN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087