| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669654
Identifier: 15669654
GI number: 15669654
Start: 1431522
End: 1432223
Strand: Reverse
Name: 15669654
Synonym: MJ1463
Alternate gene names: NA
Gene position: 1432223-1431522 (Counterclockwise)
Preceding gene: 15669656
Following gene: 15669653
Centisome position: 86.02
GC content: 33.33
Gene sequence:
>702_bases GTGGTTGTAGATGCAAAAGAAGTAGAGATGATAAATACCTTAGTTTTTGAGACATTAGGAAATCCAGAGAAGGAGAGAGA ATTTAAGTTAAAATCATTGAAGAGATGGGGATTTGACTTAATATTTGGTAAAGTAGATGGAAAAGAAACATATTTCACTG TTGAATTAGATGAAAGAAAAGCTGGAGATAAGTTTTCAAAGGATGGAAAGGAGTATGAAGTTATCGAAGTTCTTCAAGAA TTGCCAAAAAACACTGAGCTCTATGCACACATAGAAATGGAGATGGGTAAAGCATATATTGTCTGTCAATTAAGAGATGA AGATGGAAAAAACACAGAAGTTTTAAGAGTTCCAGCAGCTACTTTATTGTTAGCTTTCCTTAAAAAGAATAAATTAGCAA ACATAATAAAAGCAATAAAGAACGTTGGAATTAGTTTAGAACTTTCCATGCAGAATGGTGTTGGAGGAAAGCCATTATCT TATGAAGAATTGCCAAACGTTGCAAGAAGGTTTATAAGAAGTGCAAGAAAGGTTGAGAAAGAAACTGGTTTTGGAAGGTT GTCATTTGCATACTATGGAGAAACAAAAGATGGAGAACCAAGATATAGATTTAGCTGGCTGTTGCCAACAATTGCCTTAT TTGACTTAGATATAGCTAAAAAAGTAGAACAAACCTTGGGAATCTTAAAGGTTTCTGAATAA
Upstream 100 bases:
>100_bases TTTATAAATTTATCGATTATAGAAAATTTTTTATAGAACTTCAAACACATTTACAAATAGTTAAATTTTCAATAAAAAAT ATGAATAAAAAGGTGATATT
Downstream 100 bases:
>100_bases ATAAAATTTTTTGAGGTGAGATGATGATTTATGGGATTTTGTTAAATATTCCAGAAAAACATGCTACAAAGTATGAGGAT TTAATTAGGAGAATAATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERKAGDKFSKDGKEYEVIEVLQE LPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAATLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLS YEELPNVARRFIRSARKVEKETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE
Sequences:
>Translated_233_residues MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERKAGDKFSKDGKEYEVIEVLQE LPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAATLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLS YEELPNVARRFIRSARKVEKETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE >Mature_233_residues MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERKAGDKFSKDGKEYEVIEVLQE LPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAATLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLS YEELPNVARRFIRSARKVEKETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE
Specific function: Unknown
COG id: COG1851
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0128 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1463_METJA (Q58858)
Other databases:
- EMBL: L77117 - PIR: F64482 - RefSeq: NP_248467.1 - ProteinModelPortal: Q58858 - GeneID: 1452367 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1463 - NMPDR: fig|243232.1.peg.1504 - TIGR: MJ1463 - HOGENOM: HBG538986 - OMA: NTLVFET - ProtClustDB: PRK04205 - BioCyc: MJAN243232:MJ_1463-MONOMER - HAMAP: MF_00264 - InterPro: IPR005266 - PIRSF: PIRSF016179 - ProDom: PD023377 - TIGRFAMs: TIGR00703
Pfam domain/function: PF03673 UPF0128
EC number: NA
Molecular weight: Translated: 26609; Mature: 26609
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERK CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC AGDKFSKDGKEYEVIEVLQELPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAA CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECHH TLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLSYEELPNVARRFIRSARKVEK HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE HCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERK CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC AGDKFSKDGKEYEVIEVLQELPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAA CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECHH TLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLSYEELPNVARRFIRSARKVEK HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE HCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087