| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669633
Identifier: 15669633
GI number: 15669633
Start: 1412125
End: 1412733
Strand: Direct
Name: 15669633
Synonym: MJ1442
Alternate gene names: NA
Gene position: 1412125-1412733 (Clockwise)
Preceding gene: 15669632
Following gene: 15669634
Centisome position: 84.81
GC content: 32.18
Gene sequence:
>609_bases ATGACAAGCATAAGAATTTTTATAAAGTTCTACGGTGGGACTATGAGGAAATTTTTAATATTTTTAATATTTTTGAGTGT TTTAGGATGTGGCATAACCATTAGCGGATGCATTGGAGGAAAGAATGTTGAAGAGATTCAAAATATGCAAGAACAGGTAG TGCAACAACAACAAAATGAAAACCAGGAAGAATATCAAAATGAAGATGAAGGGGTTGATTACAATTCAATAAGGGATGTC CAGCCAATAGGAACTGCAAAAGAAGCTGATGAGAAAATTAGACCAATATTAAATGAAGTGTTTGGAGAAGTTAAATTAAT GGAATATGTTTCAACAGGAAAGCAAAATGAAGGAGAGTCTATTGTATTGACTTATGTTCCAAAGAGAAAAATAACCACTA ATGATTTTGAAAAGCTGAATGAGGCAATAAAAAAATCTGGATATTTTGAAAGTAGTGGAGGAATAGCAGGAGGAGGGCAA TCTGGAGAAGGAATGGTGTTATGGTATGTTTCAAAAGACAATAAATCTGCAATACAAATAATTTTATATCCAGATACAAA TGAAATCGTTGTTGGATACTACAAAGGTAAGATATACTCTTCACAATAA
Upstream 100 bases:
>100_bases TATAATATTTTAGCTGGATAATATTTTCACAATTTGTATTATTATCAATAATTTCCATAGCCAAAATTAAAAATTGTAAA GATAGAAAATTTATATAAGC
Downstream 100 bases:
>100_bases AATTCATCCTTTTTATAAAAATTTACGTATATATAGGTGATATTTATGGGAAAAACTTCACTCGGTTTAGATGAAAATAT TGAAGGAGCGTTATGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTSIRIFIKFYGGTMRKFLIFLIFLSVLGCGITISGCIGGKNVEEIQNMQEQVVQQQQNENQEEYQNEDEGVDYNSIRDV QPIGTAKEADEKIRPILNEVFGEVKLMEYVSTGKQNEGESIVLTYVPKRKITTNDFEKLNEAIKKSGYFESSGGIAGGGQ SGEGMVLWYVSKDNKSAIQIILYPDTNEIVVGYYKGKIYSSQ
Sequences:
>Translated_202_residues MTSIRIFIKFYGGTMRKFLIFLIFLSVLGCGITISGCIGGKNVEEIQNMQEQVVQQQQNENQEEYQNEDEGVDYNSIRDV QPIGTAKEADEKIRPILNEVFGEVKLMEYVSTGKQNEGESIVLTYVPKRKITTNDFEKLNEAIKKSGYFESSGGIAGGGQ SGEGMVLWYVSKDNKSAIQIILYPDTNEIVVGYYKGKIYSSQ >Mature_201_residues TSIRIFIKFYGGTMRKFLIFLIFLSVLGCGITISGCIGGKNVEEIQNMQEQVVQQQQNENQEEYQNEDEGVDYNSIRDVQ PIGTAKEADEKIRPILNEVFGEVKLMEYVSTGKQNEGESIVLTYVPKRKITTNDFEKLNEAIKKSGYFESSGGIAGGGQS GEGMVLWYVSKDNKSAIQIILYPDTNEIVVGYYKGKIYSSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1442_METJA (Q58837)
Other databases:
- EMBL: L77117 - PIR: A64480 - RefSeq: NP_248446.1 - ProteinModelPortal: Q58837 - GeneID: 1452346 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1442 - NMPDR: fig|243232.1.peg.1483 - TIGR: MJ1442 - BioCyc: MJAN243232:MJ_1442-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22658; Mature: 22527
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xebd3360)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIRIFIKFYGGTMRKFLIFLIFLSVLGCGITISGCIGGKNVEEIQNMQEQVVQQQQNE CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC NQEEYQNEDEGVDYNSIRDVQPIGTAKEADEKIRPILNEVFGEVKLMEYVSTGKQNEGES CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE IVLTYVPKRKITTNDFEKLNEAIKKSGYFESSGGIAGGGQSGEGMVLWYVSKDNKSAIQI EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEE ILYPDTNEIVVGYYKGKIYSSQ EEECCCCCEEEEEEECEEECCH >Mature Secondary Structure TSIRIFIKFYGGTMRKFLIFLIFLSVLGCGITISGCIGGKNVEEIQNMQEQVVQQQQNE CCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC NQEEYQNEDEGVDYNSIRDVQPIGTAKEADEKIRPILNEVFGEVKLMEYVSTGKQNEGES CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE IVLTYVPKRKITTNDFEKLNEAIKKSGYFESSGGIAGGGQSGEGMVLWYVSKDNKSAIQI EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEE ILYPDTNEIVVGYYKGKIYSSQ EEECCCCCEEEEEEECEEECCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087