| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669593
Identifier: 15669593
GI number: 15669593
Start: 1364665
End: 1365789
Strand: Reverse
Name: 15669593
Synonym: MJ1403
Alternate gene names: NA
Gene position: 1365789-1364665 (Counterclockwise)
Preceding gene: 15669599
Following gene: 15669592
Centisome position: 82.03
GC content: 36.62
Gene sequence:
>1125_bases ATGACGGTCTCCCATGGTGGGATACTTGAGGGAAGTAGTAGAGGTGGGAAGATGATGGACTGGTTAAAGAATAAAAAAGC AATCTCTCCAATCTTAGCCTTATTAATCGTGTTAGGAGTTACAATAGTCGTAGGAGCAGTATTCTACGCATGGGGAAGTA ATTTATTCGGAAACAGCCAAGAAAAGACACAGGCAGCAGTTGAAGGGACTGCAACAAATATGTTTTATGATGCTGGGGCA ATTAGGGTTGCAGCAACATGTATTGACAAAATAAGATACCAAGATGCTGATGATAGTGATTCATGGTTAGGCTATCCAAA TGGTAACGGAAAAATTGCAAAGCCATCTACTTCAAATGGATGTTATAATTCAACATACGGCACAGTATTCTATGACGAAA GATTTATTGTGGAAATTCCAGTAACTATTGACACACAAGATTATAAATTAACTGGAGTTAAAGTTGTAGGAGGAATCCCA AAAATAGTTGATATGGGTGGAACTTACACAAATGCCTTTGAAGATATATCTGCAAAGTTCTATGCATTCTGGTTACACCT AAATGACAACTATCAATTGTTGAAGAAAGATGGAACATTGTTCGTTGGATACGTAAATAAATCAGGAATGTTTGAAGTTA GTAATGGGTATGTAATTGCATGGAATCAGACAAGAGACACCTATGGAAAATTGGCTTCTTCAGTTGGTGCAACATCAGAC TCCAGCTGGGATGCAGTTAATACAACAACTGGAGTAGCTCCACTTGTAGAGACTTCATGGCCATATTATGGAACATACTG TAGTAATGTTAAGTTATACACAGCTACTGGAGAAGAATTAAAACCAGGATTTGGAAGTGGAACATTGGTTGCACAATGGT TCTGCAGTTCTGCAACATACTTAGATAAACTATTCAACAACCCAGAATATGTTGTAGGAACATTACCAAAGAACTCAGAA AAAACTGTAAAAACCTACTTATTCTTCAATACATTATACTTGCCAAACTACAAAGGATCTACAAATGATGGATATGTGAC ATTTGAAGTTCCGTTAAAAGTTGTATCTAACGAAGGAGTAACTAAAGAAGTTAAAGTTAAATTTACGGTCTATGATGATG AGTAG
Upstream 100 bases:
>100_bases AGATTTATATATTATTTTGGCATGATATACTGCATAAGTAATATAATATACATAATAACCTACACAAATTAATAAAAAAT ATATAAAATTATTACTCCCG
Downstream 100 bases:
>100_bases ATTTTCTAATTTTTTCTTTTTTATTTATATACATCCATAAATTCAAATTTAATATAAAAATCTCTTTTCAAATTCTGAAA AAAATAAAATTTATGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQEKTQAAVEGTATNMFYDAGA IRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNGCYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIP KIVDMGGTYTNAFEDISAKFYAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATYLDKLFNNPEYVVGTLPKNSE KTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGVTKEVKVKFTVYDDE
Sequences:
>Translated_374_residues MTVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQEKTQAAVEGTATNMFYDAGA IRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNGCYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIP KIVDMGGTYTNAFEDISAKFYAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATYLDKLFNNPEYVVGTLPKNSE KTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGVTKEVKVKFTVYDDE >Mature_373_residues TVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQEKTQAAVEGTATNMFYDAGAI RVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNGCYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIPK IVDMGGTYTNAFEDISAKFYAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSDS SWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATYLDKLFNNPEYVVGTLPKNSEK TVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGVTKEVKVKFTVYDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1403_METJA (Q58798)
Other databases:
- EMBL: L77117 - PIR: B64475 - RefSeq: NP_248406.1 - ProteinModelPortal: Q58798 - GeneID: 1452306 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1403 - NMPDR: fig|243232.1.peg.1443 - TIGR: MJ1403 - OMA: YDERFIV - ProtClustDB: CLSK214816 - BioCyc: MJAN243232:MJ_1403-MONOMER - GO: GO:0019861 - InterPro: IPR013373 - TIGRFAMs: TIGR02537
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41002; Mature: 40871
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe999920)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQ CCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EKTQAAVEGTATNMFYDAGAIRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNG HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCCCCC CYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIPKIVDMGGTYTNAFEDISAKF CCCCCCCEEEECCEEEEEEEEEEECCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCEE YAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD EEEEEEECCCEEEEECCCCEEEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCCC SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATY CCCCCCCCCCCCCCHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEHHHHCCHHH LDKLFNNPEYVVGTLPKNSEKTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGV HHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC TKEVKVKFTVYDDE CEEEEEEEEEECCH >Mature Secondary Structure TVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQ CCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EKTQAAVEGTATNMFYDAGAIRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNG HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCCCCC CYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIPKIVDMGGTYTNAFEDISAKF CCCCCCCEEEECCEEEEEEEEEEECCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCEE YAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD EEEEEEECCCEEEEECCCCEEEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCCC SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATY CCCCCCCCCCCCCCHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEHHHHCCHHH LDKLFNNPEYVVGTLPKNSEKTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGV HHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC TKEVKVKFTVYDDE CEEEEEEEEEECCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087